RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FAM83HQ6ZRV2 1179 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 RAPH1Q70E73 1250 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 TMCO5AQ8N6Q1 288 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 B3GALNT2Q8NCR0 500 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 CPEB3Q8NE35 698 aaKnown RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 RFWD2Q8NHY2 731 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 POMGNT1Q8WZA1 660 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 SMARCE1Q969G3 411 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 VPS33AQ96AX1 596 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 ARRDC3Q96B67 414 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 ELP4Q96EB1 424 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 ZNF764Q96H86 408 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 HIC2Q96JB3 615 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 GBP5Q96PP8 586 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 LENG8Q96PV6 779 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 HAPLN3Q96S86 360 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 HERC2P3Q9BVR0 1158 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 SEZ6LQ9BYH1 1024 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 SH2D4AQ9H788 454 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 SLC35C2Q9NQQ7 365 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 BEX4Q9NWD9 120 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 EHD2Q9NZN4 543 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 STEAP1Q9UHE8 339 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 RCE1Q9Y256 329 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 DRG1Q9Y295 367 aaKnown RBP4.49□□□□□ -1.69
VPS13D-207ENST00000476169 TCAF1Q9Y4C2 921 aa4.49□□□□□ -1.69
VPS13D-207ENST00000476169 FER1L4A9Z1Z3 1794 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 TEX13CA0A0J9YWL9 993 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 FAM237BA0A1B0GVD1 139 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 H0Y626 953 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 M0QYT0 321 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PSMA7O14818 248 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 MUSKO15146 869 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ADAM20O43506 726 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 TNFSF14O43557 240 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 WDR47O94967 919 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PDE8BO95263 885 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ITGB3P05106 788 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ATP5BP06576 529 aaKnown RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ACP5P13686 325 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 CD19P15391 556 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 GRK5P34947 590 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 THPOP40225 353 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ARL1P40616 181 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 GARSP41250 739 aaKnown RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 TXKP42681 527 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 CAPZA2P47755 286 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 MMP14P50281 582 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PPP5CP53041 499 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 RCAN1P53805 252 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 EIF3BP55884 814 aaKnown RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 FAM3BP58499 235 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 RPL7AP62424 266 aaKnown RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ACOX1Q15067 660 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 KYNUQ16719 465 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 BEAN1Q3B7T3 259 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 KAZNQ674X7 775 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 KLHL35Q6PF15 583 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 LCNL1Q6ZST4 164 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PIK3AP1Q6ZUJ8 805 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 GPR149Q86SP6 731 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 TMPRSS6Q8IU80 811 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 CCDC105Q8IYK2 499 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 SCML4Q8N228 414 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 METTL25Q8N6Q8 603 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PTGR2Q8N8N7 351 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 POMGNT2Q8NAT1 580 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 TNIP2Q8NFZ5 429 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 GLG1Q92896 1179 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 CCDC47Q96A33 483 aaKnown RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PERPQ96FX8 193 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 CMTM3Q96MX0 182 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 NR1H4Q96RI1 486 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 FNBP1Q96RU3 617 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 KLHL4Q9C0H6 718 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ERVMER34-1Q9H9K5 563 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 GLOD4Q9HC38 313 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 SEMA4BQ9NPR2 832 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 AURKAIP1Q9NWT8 199 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-207ENST00000476169 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
VPS13D-207ENST00000476169 FLT1P17948 1338 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 KDM3AQ9Y4C1 1321 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 A1L4Q6 167 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 LIPT2A6NK58 231 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ZAR1LA6NP61 321 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PSMD9O00233 223 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SLC16A3O15427 465 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SEC14L2O76054 403 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 QDPRP09417 244 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 TMEM225BP0DP42 221 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 CHN1P15882 459 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 STMN1P16949 149 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ATP5F1P24539 256 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms