RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
TVP23B-202ENST00000476139 ARL8BQ9NVJ2 186 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 NUDT5Q9UKK9 219 aa17.07■□□□□ 0.32
TVP23B-202ENST00000476139 FAM237BA0A1B0GVD1 139 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 DLDP09622 509 aaKnown RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 CD68P34810 354 aaPredicted RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 SKIV2L2P42285 1042 aaKnown RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 ERFP50548 548 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 FCGRTP55899 365 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 FERMT1Q9BQL6 677 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 ARMCX1Q9P291 453 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 SF3B1O75533 1304 aaKnown RBP eCLIP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 ALDOAP04075 364 aaKnown RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 KITP10721 976 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 CXCR3P49682 368 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 C16orf46Q6P387 395 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 ZNF570Q96NI8 536 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
TVP23B-202ENST00000476139 RPS6KL1Q9Y6S9 549 aa17.06■□□□□ 0.32
TVP23B-202ENST00000476139 E2F8A0AVK6 867 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CA12O43570 354 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 B4GALT3O60512 393 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 OR4Q2P0C623 313 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CCNFP41002 786 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 ARFIP2P53365 341 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 NIPAL4Q0D2K0 466 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PM20D1Q6GTS8 502 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 ZCCHC23Q6ZST2 131 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 RSPH1Q8WYR4 309 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 MTBPQ96DY7 904 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 EIF2B3Q9NR50 452 aaKnown RBP17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CAPN15O75808 1086 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PGAM1P18669 254 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CPA2P48052 419 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 AIF1P55008 147 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PPIDQ08752 370 aaKnown RBP17.05■□□□□ 0.32
TVP23B-202ENST00000476139 BST1Q10588 318 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 DSC3Q14574 896 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CHI3L2Q15782 390 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 OVOS1Q6IE37 1185 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PACS1Q6VY07 963 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 CYS1Q717R9 158 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PKMYT1Q99640 499 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 PRDM16Q9HAZ2 1276 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 TTC3P53804 2025 aa17.05■□□□□ 0.32
TVP23B-202ENST00000476139 F9P00740 461 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 TMPRSS15P98073 1019 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 PPM1JQ5JR12 505 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 RWDD4Q6NW29 188 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 METTL23Q86XA0 190 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 DQX1Q8TE96 717 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 RSRC1Q96IZ7 334 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 MIPEPQ99797 713 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 TPH1P17752 444 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 CRHR1P34998 444 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 GARSP41250 739 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 HCAR3P49019 387 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 CCSAPQ6IQ19 270 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 ARHGAP36Q6ZRI8 547 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 NUDCD3Q8IVD9 361 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 DNAAF3Q8N9W5 541 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 NUDCD1Q96RS6 583 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 DENND2DQ9H6A0 471 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 DMAP1Q9NPF5 467 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 LAMA2P24043 3122 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 TPP1O14773 563 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 MSI1O43347 362 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 SESN3P58005 492 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 TUSC3Q13454 348 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 CERCAMQ5T4B2 595 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 PDZD4Q76G19 769 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 AZIN2Q96A70 460 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 FAM167BQ9BTA0 163 aa17.04■□□□□ 0.32
TVP23B-202ENST00000476139 MLPHQ9BV36 600 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 GEMIN8Q9NWZ8 242 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
TVP23B-202ENST00000476139 M0QZQ0 153 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 ATP9BO43861 1147 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 JCHAINP01591 159 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 CYP11A1P05108 521 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 MYL2P10916 166 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 PDE1CQ14123 709 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-202ENST00000476139 HSF5Q4G112 596 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms