RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 RFTN1Q14699 578 aaPredicted RBP18.14■□□□□ 0.5
CCM2-207ENST00000475551 HERC3Q15034 1050 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 RAB6CQ53S08 254 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 BOLA3Q53S33 107 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 EME1Q96AY2 570 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 RAB6CQ9H0N0 254 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 IGSF9Q9P2J2 1179 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 ZNF711Q9Y462 761 aa18.14■□□□□ 0.5
CCM2-207ENST00000475551 HEMK1Q9Y5R4 338 aaPredicted RBP18.14■□□□□ 0.5
CCM2-207ENST00000475551 ARHGEF37A1IGU5 675 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 NOP56O00567 594 aaKnown RBP18.14■□□□□ 0.49
CCM2-207ENST00000475551 MAP3K6O95382 1288 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 CCND2P30279 289 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 MSX2P35548 267 aaPredicted RBP18.14■□□□□ 0.49
CCM2-207ENST00000475551 ENTPD1P49961 510 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 ABHD15Q6UXT9 468 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 HM13Q8TCT9 377 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 RXFP2Q8WXD0 754 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 RCN3Q96D15 328 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 VPS50Q96JG6 964 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 SLC4A5Q9BY07 1137 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 WDR41Q9HAD4 459 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 PRDM16Q9HAZ2 1276 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 SLC38A10Q9HBR0 1119 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 VPS45Q9NRW7 570 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 PNPLA3Q9NST1 481 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 MTMR10Q9NXD2 777 aa18.14■□□□□ 0.49
CCM2-207ENST00000475551 TOMM70O94826 608 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 BMP10O95393 424 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 PDGFRAP16234 1089 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 MAGEA12P43365 314 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 PHKA2P46019 1235 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 GMPSP49915 693 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 SPIDRQ14159 915 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 SURF1Q15526 300 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 C15orf59Q2T9L4 293 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 TRNP1Q6NT89 227 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ZPBP2Q6X784 338 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 NAPRTQ6XQN6 538 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ISL2Q96A47 359 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ZNF512Q96ME7 567 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 ZNF385DQ9H6B1 395 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 JPH1Q9HDC5 661 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 PSAT1Q9Y617 370 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 SCN4AP35499 1836 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ZNF701M0R085 212 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 CFLARO15519 480 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 H2AFYO75367 372 aaKnown RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 TADA2AO75478 443 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 GARSP41250 739 aaKnown RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 DPP6P42658 865 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 SREK1Q8WXA9 508 aaKnown RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 STON2Q8WXE9 905 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 USP13Q92995 863 aaPredicted RBP18.13■□□□□ 0.49
CCM2-207ENST00000475551 OLAHQ9NV23 265 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 ZNF358Q9NW07 568 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 MORF4L1Q9UBU8 362 aa18.13■□□□□ 0.49
CCM2-207ENST00000475551 BOLA2-SMG1P6H3BVE0 249 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 MATN2O00339 956 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 MICAL2O94851 1124 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 C8BP07358 591 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 ENO3P13929 434 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 TCF7P36402 384 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 PPARGP37231 505 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 HK2P52789 917 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 ACTR2P61160 394 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 IKBKEQ14164 716 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 CASC4Q6P4E1 433 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 LRRN4Q8WUT4 740 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 ZNF670Q9BS34 389 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 CAAP1Q9H8G2 361 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 COQ10BQ9H8M1 238 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 BARX2Q9UMQ3 279 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 ZNF232Q9UNY5 417 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 KPNA7A9QM74 516 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 G3V2L1 256 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 XPO1O14980 1071 aaKnown RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 DDNO94850 711 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 PTPN1P18031 435 aaKnown RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 PGAM1P18669 254 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 GPD2P43304 727 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 NDST2P52849 883 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 MTA1Q13330 715 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 C16orf72Q14CZ0 275 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 NRF1Q16656 503 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 LSM12Q3MHD2 195 aaKnown RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 RMND5BQ96G75 393 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 ILKAPQ9H0C8 392 aaPredicted RBP18.12■□□□□ 0.49
CCM2-207ENST00000475551 EFCAB1Q9HAE3 211 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 SNX15Q9NRS6 342 aa18.12■□□□□ 0.49
CCM2-207ENST00000475551 ZNF487B1APH4 448 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 TRIM13O60858 407 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 NR3C2P08235 984 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms