RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CLCN1P35523 988 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ACADSBP45954 432 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 STK19P49842 368 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 AFF3P51826 1226 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 METAP1P53582 386 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 GALCP54803 685 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ECT2LQ008S8 904 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 E2F5Q15329 346 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 MEA1Q16626 185 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ARHGAP44Q17R89 818 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF423Q2M1K9 1284 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 OTUD1Q5VV17 481 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 CXorf57Q6NSI4 855 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 OLFML1Q6UWY5 402 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 C14orf80Q86SX3 495 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 GLRX5Q86SX6 157 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 SLC47A2Q86VL8 602 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 CIR1Q86X95 450 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 CREBRFQ8IUR6 639 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PASD1Q8IV76 773 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 MMAAQ8IVH4 418 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 DHX40Q8IX18 779 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 DEFB106AQ8N104 65 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 AADATQ8N5Z0 425 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 KDM1BQ8NB78 822 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 FRS2Q8WU20 508 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ADAMTS14Q8WXS8 1223 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 GOLGA1Q92805 767 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PTPRN2Q92932 1015 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 IGSF8Q969P0 613 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PPP1R13BQ96KQ4 1090 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 SLC2A13Q96QE2 648 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 BTBD1Q9H0C5 482 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PABPC3Q9H361 631 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 OSGEPQ9NPF4 335 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PLCB1Q9NQ66 1216 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 TM7SF3Q9NS93 570 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 FBXL12Q9NXK8 326 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 KIAA1522Q9P206 1035 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 APEX2Q9UBZ4 518 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 PCDHGC3Q9UN70 934 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 OR51B4Q9Y5P0 310 aa7.26□□□□□ -1.25
HDAC3-207ENST00000475549 TNRC6BQ9UPQ9 1833 aaKnown RBP7.26□□□□□ -1.25
HDAC3-207ENST00000475549 ITPR1Q14643 2758 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 NBEAQ8NFP9 2946 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 NUP205Q92621 2012 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ZFYVE26Q68DK2 2539 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 A0A1W2PP55 124 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 A0A1W2PPC4 97 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FAM170AA1A519 330 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 TARSL2A2RTX5 802 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FAM47DPA6NHR8 397 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 H0Y626 953 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 H0Y8X5 98 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 RNF103O00237 685 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 PLK4O00444 970 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CAPN9O14815 690 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 MID1O15344 667 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SART1O43290 800 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 MED7O43513 233 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 TRIM16O95361 564 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 DNTTP04053 509 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SRPRAP08240 638 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SLC8A1P32418 973 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 DRD3P35462 400 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 USP8P40818 1118 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 MATKP42679 507 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CTSKP43235 329 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 PLK1P53350 603 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CENPCQ03188 943 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 KCNMA1Q12791 1236 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CDH18Q13634 790 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 HNRNPDQ14103 355 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SHBQ15464 509 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CST6Q15828 149 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 EXOC3L4Q17RC7 722 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 MIIPQ5JXC2 388 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF776Q68DI1 518 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 KIAA0895LQ68EN5 471 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 NCEH1Q6PIU2 408 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 IL27RAQ6UWB1 636 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CCNI2Q6ZMN8 369 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FAM183BPQ6ZVS7 135 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 USP30Q70CQ3 517 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ENOSF1Q7L5Y1 443 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 STK40Q8N2I9 435 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 C1orf131Q8NDD1 294 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SETD7Q8WTS6 366 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SNX19Q92543 992 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FAM131CQ96AQ9 280 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 BTN2A3PQ96KV6 586 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 DDX50Q9BQ39 737 aaKnown RBP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FEM1AQ9BSK4 669 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 FBRSQ9HAH7 460 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SGK2Q9HBY8 427 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ARHGAP20Q9P2F6 1191 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ADAMTS1Q9UHI8 967 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms