RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 KLF16Q9BXK1 252 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-210ENST00000475329 LRRC3Q9BY71 257 aa14.11□□□□□ -0.15
TRAF4-210ENST00000475329 ASAH2Q9NR71 780 aa14.11□□□□□ -0.15
TRAF4-210ENST00000475329 RAB6BQ9NRW1 208 aa14.11□□□□□ -0.15
TRAF4-210ENST00000475329 TMEM248Q9NWD8 314 aa14.11□□□□□ -0.15
TRAF4-210ENST00000475329 MPP6Q9NZW5 540 aa14.11□□□□□ -0.15
TRAF4-210ENST00000475329 NUP210Q8TEM1 1887 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 DRGXA6NNA5 263 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 DFFAO00273 331 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 CHADO15335 359 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 OLFM2O95897 454 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 IRF1P10914 325 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 MYL4P12829 197 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 PFKLP17858 780 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 CORO1AP31146 461 aaKnown RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 HOXA9P31269 272 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 CYP4F8P98187 520 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 RAB30Q15771 203 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 UAP1Q16222 522 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 ANKRD20A2Q5SQ80 823 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 ANKRD20A1Q5TYW2 823 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 ANKRD20A3Q5VUR7 823 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 AFMIDQ63HM1 303 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 FBXL22Q6P050 247 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 GAREM2Q75VX8 874 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 TRMT10CQ7L0Y3 403 aaKnown RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 DENND1CQ8IV53 801 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 CCDC13Q8IYE1 715 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 TAB3Q8N5C8 712 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 NAT8LQ8N9F0 302 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 SLC22A17Q8WUG5 538 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 RPRD1AQ96P16 312 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
TRAF4-210ENST00000475329 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 PHACTR1Q9C0D0 580 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 RNF38Q9H0F5 515 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 SEPT10Q9P0V9 454 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 DPP7Q9UHL4 492 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 MSRAQ9UJ68 235 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 NOTCH4Q99466 2003 aa14.1□□□□□ -0.15
TRAF4-210ENST00000475329 TRAV19A0A0A6YYK7 116 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 LATS1O95835 1130 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 HNRNPA1P09651 372 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAF4-210ENST00000475329 EPCAMP16422 314 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 HDCP19113 662 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 FDFT1P37268 417 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 PBX2P40425 430 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 MAGEA6P43360 314 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 MAPKAPK2P49137 400 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 IRAK1P51617 712 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 NDST2P52849 883 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 FAM193AP78312 1265 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 HIF1AQ16665 826 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 FAM133BQ5BKY9 247 aaKnown RBP14.09□□□□□ -0.15
TRAF4-210ENST00000475329 RABGAP1LQ5R372 815 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 ANKRD22Q5VYY1 191 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 DENND2CQ68D51 928 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 TXNDC8Q6A555 127 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 LRIG3Q6UXM1 1119 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 PPP1R21Q6ZMI0 780 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 TFAP2DQ7Z6R9 452 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 LRRC49Q8IUZ0 686 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 UMODL1-AS1Q8N2C9 162 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 IGSF8Q969P0 613 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
TRAF4-210ENST00000475329 ZIM3Q96PE6 472 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 TSGA13Q96PP4 275 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 RBM15Q96T37 977 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■■□ 22.9
TRAF4-210ENST00000475329 SLC39A8Q9C0K1 460 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 LMAN2LQ9H0V9 348 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 NKX2-4Q9H2Z4 354 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 PABPC3Q9H361 631 aaKnown RBP14.09□□□□□ -0.15
TRAF4-210ENST00000475329 RETREG1Q9H6L5 497 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 GKN1Q9NS71 199 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 SMPD4Q9NXE4 827 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 FAM53CQ9NYF3 392 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 PLAAQ9Y263 795 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 MIA3Q5JRA6 1907 aa14.09□□□□□ -0.15
TRAF4-210ENST00000475329 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-210ENST00000475329 GOLGA6L7A0A1B0GV03 622 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-210ENST00000475329 XYLBO75191 536 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 CNTN5O94779 1100 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 TMEM63AO94886 807 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 PTPN2P17706 415 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 CCNCP24863 283 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 PTPN3P26045 913 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 SLC6A4P31645 630 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 EPHA5P54756 1037 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 ARL4CP56559 192 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 SMAD3P84022 425 aaKnown RBP14.08□□□□□ -0.16
TRAF4-210ENST00000475329 WASHC5Q12768 1159 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 SEMA5AQ13591 1074 aa14.08□□□□□ -0.16
TRAF4-210ENST00000475329 C5orf22Q49AR2 442 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms