RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TMEM110Q86TL2 294 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 NOP9Q86U38 636 aaKnown RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 ADIPOR2Q86V24 386 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 ZNF677Q86XU0 584 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 LGI2Q8N0V4 545 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 CFAP52Q8N1V2 620 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 RNF214Q8ND24 703 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 EPS8L1Q8TE68 723 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 BTN2A3PQ96KV6 586 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 FCRL2Q96LA5 508 aaPredicted RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 NAP1L5Q96NT1 182 aaPredicted RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 CPXM1Q96SM3 734 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 SLC4A5Q9BY07 1137 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 NUCKS1Q9H1E3 243 aaKnown RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 DDIT4Q9NX09 232 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 EIF2B4Q9UI10 523 aaKnown RBP15.64■□□□□ 0.09
VARS-223ENST00000474643 EPG5Q9HCE0 2579 aa15.64■□□□□ 0.09
VARS-223ENST00000474643 SPAARA0A1B0GVQ0 90 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 A0A1W2PQC6 194 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 FAM47DPA6NHR8 397 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 GABBR2O75899 941 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 FSBPO95073 299 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 SEMA4FO95754 770 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 TRUB2O95900 331 aaKnown RBP15.63■□□□□ 0.09
VARS-223ENST00000474643 MMEP08473 750 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 SLC2A3P11169 496 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 ZBTB16Q05516 673 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 SEMA3BQ13214 749 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 ZC3H12AQ5D1E8 599 aaKnown RBP15.63■□□□□ 0.09
VARS-223ENST00000474643 MS4A13Q5J8X5 152 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 RABGAP1LQ5R372 815 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 RAP1GAP2Q684P5 730 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 ERICH1Q86X53 443 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 WDTC1Q8N5D0 677 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 FIBINQ8TAL6 211 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 WFDC5Q8TCV5 224 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 SETD7Q8WTS6 366 aaKnown RBP15.63■□□□□ 0.09
VARS-223ENST00000474643 PRICKLE1Q96MT3 831 aaPredicted RBP15.63■□□□□ 0.09
VARS-223ENST00000474643 OMDQ99983 421 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 PCED1AQ9H1Q7 454 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 TMEM245Q9H330 911 aa15.63■□□□□ 0.09
VARS-223ENST00000474643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.63■□□□□ 0.09
VARS-223ENST00000474643 KIAA1522Q9P206 1035 aaPredicted RBP15.63■□□□□ 0.09
VARS-223ENST00000474643 METTL12A8MUP2 240 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 UPK3BL1B0FP48 263 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 UPK3BL2E5RIL1 263 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 PAPSS1O43252 624 aaPredicted RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 LUC7L3O95232 432 aaKnown RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 LSM8O95777 96 aaKnown RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 FERP16591 822 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 SPINK2P20155 84 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 TACR2P21452 398 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 CCR1P32246 355 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 MATKP42679 507 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 RPL34P49207 117 aaKnown RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 AFF3P51826 1226 aaKnown RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 CDR2Q01850 454 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 SLC14A1Q13336 389 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 NR1I3Q14994 352 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 EFHC1Q5JVL4 640 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 TTC39BQ5VTQ0 682 aaPredicted RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 SYPL2Q5VXT5 272 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 NADSYN1Q6IA69 706 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 UNQ6494/PRO21346Q6UXR6 183 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 BEND5Q7L4P6 421 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 SLC20A1Q8WUM9 679 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 DNASE2BQ8WZ79 361 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 SGK2Q9HBY8 427 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 PRSS16Q9NQE7 514 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 DNAAF2Q9NVR5 837 aaKnown RBP15.62■□□□□ 0.09
VARS-223ENST00000474643 IFNKQ9P0W0 207 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 PI4KAP42356 2102 aa15.62■□□□□ 0.09
VARS-223ENST00000474643 ADAMTS9Q9P2N4 1935 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 HSF2BPO75031 334 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 TRIM16O95361 564 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 IGLV3-19P01714 112 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 RPS14P62263 151 aaKnown RBP15.61■□□□□ 0.09
VARS-223ENST00000474643 NME3Q13232 169 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 PTPRNQ16849 979 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 PTPN20Q4JDL3 420 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 PITRM1Q5JRX3 1037 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 NAA35Q5VZE5 725 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 FAM183BPQ6ZVS7 135 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 SND1Q7KZF4 910 aaKnown RBP eCLIP15.61■□□□□ 0.09
VARS-223ENST00000474643 PIP4P1Q86T03 277 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 GAS2L3Q86XJ1 694 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 NAXDQ8IW45 347 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 C18orf8Q96DM3 657 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 PPP1R9BQ96SB3 815 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 SCNM1Q9BWG6 230 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 GAREM1Q9H706 876 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 NOCTQ9UK39 431 aaKnown RBP15.61■□□□□ 0.09
VARS-223ENST00000474643 SCML1Q9UN30 329 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 CACNA1BQ00975 2339 aa15.61■□□□□ 0.09
VARS-223ENST00000474643 CEP295Q9C0D2 2601 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 EDDM13A0A1B0GTR0 161 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 KCNU1A8MYU2 1149 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 CBFA2T2O43439 604 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms