RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 USP15Q9Y4E8 981 aaPredicted RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 A0A1W2PQH9 124 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 CACNG3O60359 315 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 POLBP06746 335 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 SRGAP2BP0DMP2 458 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 SLC11A1P49279 550 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 MLLT6P55198 1093 aaPredicted RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 WDR4P57081 412 aaKnown RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 EFTUD2Q15029 972 aaKnown RBP eCLIP22.31■■□□□ 1.16
CCM2-206ENST00000474617 TIFABQ6ZNK6 161 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 MARK2Q7KZI7 788 aaKnown RBP22.31■■□□□ 1.16
CCM2-206ENST00000474617 CTAGE3PQ8IX95 158 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 NPWQ8N729 165 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 CASP10Q92851 521 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 SLC39A13Q96H72 371 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 MARCH5Q9NX47 278 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 HSFX1Q9UBD0 423 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 NEU3Q9UQ49 428 aa22.31■■□□□ 1.16
CCM2-206ENST00000474617 OAS1P00973 400 aaKnown RBP22.3■■□□□ 1.16
CCM2-206ENST00000474617 RFC2P35250 354 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 MTFR1Q15390 333 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 ANO4Q32M45 955 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 NAPEPLDQ6IQ20 393 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 RWDD4Q6NW29 188 aaKnown RBP22.3■■□□□ 1.16
CCM2-206ENST00000474617 CCDC117Q8IWD4 279 aaPredicted RBP22.3■■□□□ 1.16
CCM2-206ENST00000474617 C4orf33Q8N1A6 199 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 ATPAF2Q8N5M1 289 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 PPM1NQ8N819 430 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 ATP6V0D2Q8N8Y2 350 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 LRRC8CQ8TDW0 803 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 ACMSDQ8TDX5 336 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 DPF3Q92784 378 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 FCRL2Q96LA5 508 aaPredicted RBP22.3■■□□□ 1.16
CCM2-206ENST00000474617 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 STARD13Q9Y3M8 1113 aa22.3■■□□□ 1.16
CCM2-206ENST00000474617 MYO1CO00159 1063 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 ANXA9O76027 345 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 GALTP07902 379 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 OR4Q2P0C623 313 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 CPB1P15086 417 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 TAC1P20366 129 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 RPA3P35244 121 aaPredicted RBP22.29■■□□□ 1.16
CCM2-206ENST00000474617 NDST2P52849 883 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 RING1Q06587 406 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 IFT88Q13099 833 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 TRIP4Q15650 581 aaPredicted RBP22.29■■□□□ 1.16
CCM2-206ENST00000474617 DBN1Q16643 649 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 AFMIDQ63HM1 303 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 KCTD11Q693B1 232 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 CHSY1Q86X52 802 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 TRIM42Q8IWZ5 723 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 RTL3Q8N8U3 475 aaKnown RBP22.29■■□□□ 1.16
CCM2-206ENST00000474617 OVCA2Q8WZ82 227 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 HIPK3Q9H422 1215 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 NMUR1Q9HB89 426 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 CASS4Q9NQ75 786 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 BACE2Q9Y5Z0 518 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 MYO16Q9Y6X6 1858 aa22.29■■□□□ 1.16
CCM2-206ENST00000474617 A0A1W2PPM1 405 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 KCNK1O00180 336 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 LPXNO60711 386 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 SPAG7O75391 227 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 HAPLN1P10915 354 aaPredicted RBP22.28■■□□□ 1.16
CCM2-206ENST00000474617 CCNFP41002 786 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 TBX4P57082 545 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 FAAP100Q0VG06 881 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 LACTB2Q53H82 288 aaPredicted RBP22.28■■□□□ 1.16
CCM2-206ENST00000474617 CASC4Q6P4E1 433 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 SPATA21Q7Z572 469 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 CTU1Q7Z7A3 348 aaKnown RBP22.28■■□□□ 1.16
CCM2-206ENST00000474617 CEP57Q86XR8 500 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 GDAP1Q8TB36 358 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 DEPDC1BQ8WUY9 529 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 FBXO32Q969P5 355 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 BTN2A3PQ96KV6 586 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 GPR62Q9BZJ7 368 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 IL22Q9GZX6 179 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 IQCGQ9H095 443 aaKnown RBP22.28■■□□□ 1.16
CCM2-206ENST00000474617 ARL2BPQ9Y2Y0 163 aa22.28■■□□□ 1.16
CCM2-206ENST00000474617 MTMR11A4FU01 709 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 ARHGAP42A6NI28 874 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 MATN3O15232 486 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 RHOQP17081 205 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 SYCP2LQ5T4T6 812 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 STXBP5Q5T5C0 1151 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 PDZD8Q8NEN9 1154 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 SH3TC2Q8TF17 1288 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 PPM1EQ8WY54 764 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 MRRFQ96E11 262 aaKnown RBP22.27■■□□□ 1.16
CCM2-206ENST00000474617 ELAC2Q9BQ52 826 aaKnown RBP22.27■■□□□ 1.16
CCM2-206ENST00000474617 PITPNM3Q9BZ71 974 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 PLAC1Q9HBJ0 212 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 FGFR1OP2Q9NVK5 253 aa22.27■■□□□ 1.16
CCM2-206ENST00000474617 CCT8L1PA6NM43 557 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 TBKBP1A7MCY6 615 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 E9PAM4 449 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 PQBP1O60828 265 aaKnown RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 GSTA1P08263 222 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 MAGEA9P43362 315 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 TUFMP49411 452 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms