RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PCED1AQ9H1Q7 454 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 GANQ9H2C0 597 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 TAB2Q9NYJ8 693 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 COX16Q9P0S2 106 aa19.18■□□□□ 0.66
COL7A1-209ENST00000474432 EIF2B4Q9UI10 523 aaKnown RBP19.18■□□□□ 0.66
COL7A1-209ENST00000474432 A0A1B0GTW7 788 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 MEI4A8MW99 385 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 F5H5T6 163 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 H0Y626 953 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 TOP3BO95985 862 aaKnown RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 SRPRAP08240 638 aaKnown RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 SLC2A3P11169 496 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 MZF1P28698 734 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 NOS2P35228 1153 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 KLK7P49862 253 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 PLK1P53350 603 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 BPIFB4P59827 614 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 GRIK2Q13002 908 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 C5orf22Q49AR2 442 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 TRNP1Q6NT89 227 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 C14orf80Q86SX3 495 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 NOP9Q86U38 636 aaKnown RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 DHX40Q8IX18 779 aaKnown RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 NOX5Q96PH1 765 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 FAM129BQ96TA1 746 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 ORAI3Q9BRQ5 295 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 PIGVQ9NUD9 493 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 SERGEFQ9UGK8 458 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-209ENST00000474432 HS3ST4Q9Y661 456 aa19.17■□□□□ 0.66
COL7A1-209ENST00000474432 FAM170AA1A519 330 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 OPHN1O60890 802 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 SYPP08247 313 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 GNSP15586 552 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ABCB4P21439 1286 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 GGCXP38435 758 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 MATKP42679 507 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 NUMBP49757 651 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 STK19P49842 368 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ATXN3P54252 364 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 FAM193AP78312 1265 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ECT2LQ008S8 904 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 CENPCQ03188 943 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 NME3Q13232 169 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 AUHQ13825 339 aaKnown RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ZNF776Q68DI1 518 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 XYLT1Q86Y38 959 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 ZNF683Q8IZ20 524 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 PTPRN2Q92932 1015 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 RPL10LQ96L21 214 aaKnown RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 STK33Q9BYT3 514 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 MIR1-1HGQ9H1L0 117 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 PABPC3Q9H361 631 aaKnown RBP19.16■□□□□ 0.66
COL7A1-209ENST00000474432 SLC12A6Q9UHW9 1150 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 OR51B4Q9Y5P0 310 aa19.16■□□□□ 0.66
COL7A1-209ENST00000474432 A0A1B0GVM2 712 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 TCAF2A6NFQ2 919 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 F8VZ95 297 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 M0QYT0 321 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 EPHB6O15197 1021 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 BCAT2O15382 392 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-209ENST00000474432 PAGE1O75459 146 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 ADCY5O95622 1261 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 SEMA4FO95754 770 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 DNTTP04053 509 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 PDGFRAP16234 1089 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 CXCR3P49682 368 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 ST8SIA6P61647 398 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 KRT31Q15323 416 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 C2CD6Q53TS8 623 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 TAF3Q5VWG9 929 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 BNIPLQ7Z465 357 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 ZDHHC17Q8IUH5 632 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 EPS8L1Q8TE68 723 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 BIRC7Q96CA5 298 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 BTBD1Q9H0C5 482 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 VPS16Q9H269 839 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 IL21RQ9HBE5 538 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 ARHGEF38Q9NXL2 777 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 NOCTQ9UK39 431 aaKnown RBP19.15■□□□□ 0.66
COL7A1-209ENST00000474432 PLXNA2O75051 1894 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 FRYQ5TBA9 3013 aa19.15■□□□□ 0.66
COL7A1-209ENST00000474432 TMEM131Q92545 1883 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 SPAARA0A1B0GVQ0 90 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 TARSL2A2RTX5 802 aaKnown RBP19.14■□□□□ 0.65
COL7A1-209ENST00000474432 IGHV4-34P06331 123 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 MMEP08473 750 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 VAV1P15498 845 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 SCNN1AP37088 669 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 NOMO3P69849 1222 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 SLC12A1Q13621 1099 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 TTC39BQ5VTQ0 682 aaPredicted RBP19.14■□□□□ 0.65
COL7A1-209ENST00000474432 USP30Q70CQ3 517 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 HDDC3Q8N4P3 179 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 FRS2Q8WU20 508 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 RNF34Q969K3 372 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 C18orf8Q96DM3 657 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 PGAP3Q96FM1 320 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms