RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 DENND1CQ8IV53 801 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 MAP7D3Q8IWC1 876 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ZNF683Q8IZ20 524 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CPXM2Q8N436 756 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 SPEM1Q8N4L4 309 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 KCTD6Q8NC69 237 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ZBTB44Q8NCP5 570 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 RAPGEF5Q92565 580 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 NAPGQ99747 312 aaPredicted RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 DDX50Q9BQ39 737 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 MAGEB5Q9BZ81 275 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 LINC00597Q9H2U6 94 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 RETREG1Q9H6L5 497 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ZWILCHQ9H900 591 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 PRDM16Q9HAZ2 1276 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 PCDH18Q9HCL0 1135 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 DUS2Q9NX74 493 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 XPO7Q9UIA9 1087 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 EFR3BQ9Y2G0 817 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 R4GN57 208 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 OTOGLQ3ZCN5 2332 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FAM72CH0Y354 149 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 SLC9A3R1O14745 358 aaPredicted RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 LRIG2O94898 1065 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PAPSS2O95340 614 aaPredicted RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 MOCS2O96007 188 aaPredicted RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 IRF1P10914 325 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PYGMP11217 842 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 TNNT1P13805 278 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 TACR2P21452 398 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 HOXC13P31276 330 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CASQ1P31415 396 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 GJA4P35212 333 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PTPN7P35236 360 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CHKAP35790 457 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CXCL12P48061 93 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 GALK1P51570 392 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CCR3P51677 355 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CDH6P55285 790 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 DPYSL3Q14195 570 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PON2Q15165 354 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PPP2R5EQ16537 467 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 SMTNL2Q2TAL5 461 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 TMEM196Q5HYL7 178 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FAM72AQ5TYM5 149 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 DCAF12L1Q5VU92 463 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FAM72DQ6L9T8 149 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FBXL22Q6P050 247 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 SYT10Q6XYQ8 523 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FAM72BQ86X60 149 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 ADGRG2Q8IZP9 1017 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 PYROXD2Q8N2H3 581 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 HSPH1Q92598 858 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 RBM41Q96IZ5 413 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 PBKQ96KB5 322 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 EPAS1Q99814 870 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 ZNF670Q9BS34 389 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FAM126AQ9BYI3 521 aaPredicted RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 DHX35Q9H5Z1 703 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 ECT2Q9H8V3 914 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 FBRSL1Q9HCM7 1045 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG5-203ENST00000473643 GPATCH2LQ9NWQ4 482 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 ZSCAN32Q9NX65 697 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 CWC15Q9P013 229 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 DNAI1Q9UI46 699 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 TTC7AQ9ULT0 858 aaPredicted RBP9.38□□□□□ -0.91
SMG5-203ENST00000473643 PCDHGA2Q9Y5H1 932 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 WNT6Q9Y6F9 365 aa9.38□□□□□ -0.91
SMG5-203ENST00000473643 COL4A2P08572 1712 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 DNAH14Q0VDD8 3507 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 GOLGA6L7A0A1B0GV03 622 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 LRRD1A4D1F6 860 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 E9PAM4 449 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 F5H5T6 163 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 H3BRJ5 948 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 KCNK3O14649 394 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 LILRB5O75023 590 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
SMG5-203ENST00000473643 KRT1P04264 644 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 CD48P09326 243 aa9.37□□□□□ -0.91
SMG5-203ENST00000473643 TCP1P17987 556 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms