RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 OPHN1O60890 802 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 DGKIO75912 1065 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 PGAM1P18669 254 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 PTPN9P43378 593 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 USP4Q13107 963 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 SLC26A9Q7LBE3 791 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 SULF1Q8IWU6 871 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 DEFB106AQ8N104 65 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 PLD6Q8N2A8 252 aaKnown RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 CCNYQ8ND76 341 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 AGR3Q8TD06 166 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 FCRL3Q96P31 734 aaPredicted RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 ZCWPW1Q9H0M4 648 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 CLDN5O00501 218 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 TOMM70O94826 608 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 UQCRBP14927 111 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 RAG1P15918 1043 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 GRM5P41594 1212 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 NDUFV1P49821 464 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 TBL3Q12788 808 aaKnown RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 DLG1Q12959 904 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 OTUD1Q5VV17 481 aaPredicted RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 ST13P4Q8IZP2 240 aaPredicted RBP21.63■■□□□ 1.05
COL18A1-207ENST00000473212 ARHGAP18Q8N392 663 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 TTC39CQ8N584 583 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 CENPKQ9BS16 269 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 TXNDC16Q9P2K2 825 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 SF3B1O75533 1304 aaKnown RBP eCLIP21.62■■□□□ 1.052e-6■■■■■ 74.3
COL18A1-207ENST00000473212 LTBP3Q9NS15 1303 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 BEST1O76090 585 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 STAU1O95793 577 aaKnown RBP21.62■■□□□ 1.05
COL18A1-207ENST00000473212 ALOX15P16050 662 aaPredicted RBP21.62■■□□□ 1.05
COL18A1-207ENST00000473212 TRIP10Q15642 601 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 DLG2Q15700 870 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 JADE3Q92613 823 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 PGBD4Q96DM1 585 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 CCDC28BQ9BUN5 200 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 FAM96AQ9H5X1 160 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 SETD4Q9NVD3 440 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 ETAA1Q9NY74 926 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 ZSWIM8A7E2V4 1837 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 NUP205Q92621 2012 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 BRCA2P51587 3418 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 H3BRB1 525 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 RTN3O95197 1032 aaPredicted RBP21.62■■□□□ 1.05
COL18A1-207ENST00000473212 MYL4P12829 197 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 HARS2P49590 506 aaKnown RBP21.62■■□□□ 1.05
COL18A1-207ENST00000473212 DEUP1Q05D60 604 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 POU5F1BQ06416 359 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 DCAF6Q58WW2 860 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 ADAM32Q8TC27 787 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 VCX3BQ9H321 246 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 TUT1Q9H6E5 874 aaKnown RBP21.62■■□□□ 1.05
COL18A1-207ENST00000473212 CACNG4Q9UBN1 327 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 PACSIN3Q9UKS6 424 aa21.62■■□□□ 1.05
COL18A1-207ENST00000473212 E9PBE3 544 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ZBTB14O43829 449 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 KLHL41O60662 606 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 SETSIPP0DME0 302 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 CPA3P15088 417 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 VCLP18206 1134 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 TTLL12Q14166 644 aaPredicted RBP21.61■■□□□ 1.05
COL18A1-207ENST00000473212 INSCQ1MX18 579 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 FBXW8Q8N3Y1 598 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 RNF169Q8NCN4 708 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 SNX27Q96L92 541 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 PRDM12Q9H4Q4 367 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 COG4Q9H9E3 785 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 CAB39LQ9H9S4 337 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 COX4I1P13073 169 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 MX2P20592 715 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 SULT1E1P49888 294 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ADIGQ0VDE8 80 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 BST2Q10589 180 aaKnown RBP21.61■■□□□ 1.05
COL18A1-207ENST00000473212 GRIK4Q16099 956 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 C9orf57Q5W0N0 161 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ZNF567Q8N184 647 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 NME8Q8N427 588 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ZNF781Q8N8C0 355 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 ACVR1CQ8NER5 493 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 OR52K1Q8NGK4 314 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 AGAP2Q99490 1192 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 OSMRQ99650 979 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 RNF39Q9H2S5 420 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 SNX15Q9NRS6 342 aa21.61■■□□□ 1.05
COL18A1-207ENST00000473212 A0A1B0GVG6 124 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 CCDC78A2IDD5 438 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ANKRD33BA6NCL7 494 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 FAM72CH0Y354 149 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ACAT1P24752 427 aaKnown RBP21.6■■□□□ 1.05
COL18A1-207ENST00000473212 NME3Q13232 169 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 MMEL1Q495T6 779 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 SLC9B1Q4ZJI4 515 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 FAM72AQ5TYM5 149 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 SYPL2Q5VXT5 272 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 FAM72DQ6L9T8 149 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 HFE2Q6ZVN8 426 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 FAM72BQ86X60 149 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms