RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NEU3Q9UQ49 428 aa13.55□□□□□ -0.24
TPM3-216ENST00000473036 MAP1BP46821 2468 aaKnown RBP13.55□□□□□ -0.24
TPM3-216ENST00000473036 DCDC2BA2VCK2 349 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 F9P00740 461 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 CYBBP04839 570 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 SLC2A3P11169 496 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 HOXA6P31267 233 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 ADRA1BP35368 520 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 NUMBP49757 651 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 GALCP54803 685 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 LMAN2Q12907 356 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 FBXO43Q4G163 708 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 CCDC122Q5T0U0 273 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 CXorf57Q6NSI4 855 aaKnown RBP13.54□□□□□ -0.24
TPM3-216ENST00000473036 TXNDC5Q8NBS9 432 aaKnown RBP13.54□□□□□ -0.24
TPM3-216ENST00000473036 HJURPQ8NCD3 748 aaPredicted RBP13.54□□□□□ -0.24
TPM3-216ENST00000473036 BTBD6Q96KE9 485 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 SLC2A11Q9BYW1 496 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
TPM3-216ENST00000473036 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
TPM3-216ENST00000473036 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 SPTLC3Q9NUV7 552 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 CHD5Q8TDI0 1954 aa13.54□□□□□ -0.24
TPM3-216ENST00000473036 CKAP5Q14008 2032 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 DRGXA6NNA5 263 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 F5H5T6 163 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 LUC7L3O95232 432 aaKnown RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 CYP1A2P05177 515 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 TCF4P15884 667 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 WASP42768 502 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 CXCL12P48061 93 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 PXNP49023 591 aaPredicted RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 LIMK1P53667 647 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 MRPS21P82921 87 aaKnown RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 PTPRNQ16849 979 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 FUT11Q495W5 492 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 PPM1JQ5JR12 505 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 MANEALQ5VSG8 457 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 DCUN1D2Q6PH85 259 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 CCAR2Q8N163 923 aaKnown RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 PYROXD2Q8N2H3 581 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 ALG14Q96F25 216 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 C1orf74Q96LT6 269 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 HHIPQ96QV1 700 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
TPM3-216ENST00000473036 CNPY3Q9BT09 278 aa13.53□□□□□ -0.24
TPM3-216ENST00000473036 A0A1W2PQF6 199 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 E9PAM4 449 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 PTMAP06454 111 aaKnown RBP13.52□□□□□ -0.25
TPM3-216ENST00000473036 FECHP22830 423 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 MZF1P28698 734 aaPredicted RBP13.52□□□□□ -0.25
TPM3-216ENST00000473036 IL12RB1P42701 662 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 CTSOP43234 321 aaPredicted RBP13.52□□□□□ -0.25
TPM3-216ENST00000473036 SPEM2Q0P670 501 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 DMC1Q14565 340 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 KIAA1211LQ6NV74 962 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 PRR23CQ6ZRP0 262 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPM3-216ENST00000473036 ANKS1BQ7Z6G8 1248 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 MFN1Q8IWA4 741 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
TPM3-216ENST00000473036 CYB5D2Q8WUJ1 264 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 EXOC4Q96A65 974 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 MYO19Q96H55 970 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.25
TPM3-216ENST00000473036 PANX2Q96RD6 677 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 PPP1R9BQ96SB3 815 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 SEMA4GQ9NTN9 838 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 NDFIP2Q9NV92 336 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 ELOVL2Q9NXB9 296 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 CACNA2D2Q9NY47 1150 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 MPP6Q9NZW5 540 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 SLC12A6Q9UHW9 1150 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 GGA2Q9UJY4 613 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 MMP17Q9ULZ9 603 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 OR51B4Q9Y5P0 310 aa13.52□□□□□ -0.25
TPM3-216ENST00000473036 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 LRCH4O75427 683 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 MYBL1P10243 752 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 PABPC1P11940 636 aaKnown RBP13.51□□□□□ -0.25
TPM3-216ENST00000473036 PSMA2P25787 234 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 IL1R2P27930 398 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 CSKP41240 450 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 FNTBP49356 437 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms