RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 DNAJC28Q9NX36 388 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 DONSONQ9NYP3 566 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 CYTH4Q9UIA0 394 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 RASAL2Q9UJF2 1139 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 GGA2Q9UJY4 613 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 NUDT5Q9UKK9 219 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 CA5BQ9Y2D0 317 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 STYXL1Q9Y6J8 313 aa6.1□□□□□ -1.43
SIK3-208ENST00000472648 NIPBLQ6KC79 2804 aaeCLIP6.1□□□□□ -1.43
SIK3-208ENST00000472648 TACC2O95359 2948 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ANKRD36A6QL64 1941 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 A0A1W2PQC6 194 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 WIPF3A6NGB9 483 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 A8MXQ7 604 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 C10orf142B7Z368 130 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 MUSKO15146 869 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 RNGTTO60942 597 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 TBCAO75347 108 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 TACC1O75410 805 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 CNTN5O94779 1100 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 CLSTN1O94985 981 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 LDHAP00338 332 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 PLA2G4BP0C869 781 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 RALAP11233 206 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 PABPC1P11940 636 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 CD82P27701 267 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 HOXD9P28356 352 aaPredicted RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 DDIT3P35638 169 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 RPIAP49247 311 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 SLC12A3P55017 1021 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 COG7P83436 770 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 GTF2BQ00403 316 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 SEPT6Q14141 434 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 FGL2Q14314 439 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 DRAP1Q14919 205 aaPredicted RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 HNRNPA1L2Q32P51 320 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 KMT5BQ4FZB7 885 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ZNF542PQ5EBM4 170 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 PERM1Q5SV97 790 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 B3GNT8Q7Z7M8 397 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ADIPOR2Q86V24 386 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 TRIM69Q86WT6 500 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ZNF548Q8NEK5 533 aaPredicted RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 JPH3Q8WXH2 748 aaPredicted RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 SAAL1Q96ER3 474 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 IFT43Q96FT9 208 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ABHD17AQ96GS6 310 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 CDK5RAP1Q96SZ6 601 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 PLIN2Q99541 437 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 IL12RB2Q99665 862 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 CCDC3Q9BQI4 270 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 FOXP3Q9BZS1 431 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ZSWIM6Q9HCJ5 1215 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
SIK3-208ENST00000472648 OSER1Q9NX31 292 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 ARHGAP20Q9P2F6 1191 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 NAGPAQ9UK23 515 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 AGO1Q9UL18 857 aaKnown RBP6.09□□□□□ -1.43
SIK3-208ENST00000472648 LOXL2Q9Y4K0 774 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 NME7Q9Y5B8 376 aa6.09□□□□□ -1.43
SIK3-208ENST00000472648 CROCCQ5TZA2 2017 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 EDDM13A0A1B0GTR0 161 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 TTLL8A6PVC2 850 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 EFCAB7A8K855 629 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 ZNF891A8MT65 544 aaPredicted RBP6.08□□□□□ -1.44
SIK3-208ENST00000472648 D6RAR5 112 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 PFKFB2O60825 505 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 CTDNEP1O95476 244 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 IL1BP01584 269 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 FDPSP14324 419 aaKnown RBP6.08□□□□□ -1.44
SIK3-208ENST00000472648 ITIH1P19827 911 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 NOS2P35228 1153 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 PSEN1P49768 467 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 ZNF131P52739 623 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 MAPK10P53779 464 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 MAP3K7CLP57077 242 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 ZNF445P59923 1031 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 EFEMP1Q12805 493 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 DHX8Q14562 1220 aaKnown RBP6.08□□□□□ -1.44
SIK3-208ENST00000472648 DEFB133Q30KQ1 61 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 ARSHQ5FYA8 562 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 DYMQ7RTS9 669 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 GPBP1Q86WP2 473 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 DTX1Q86Y01 620 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 ZC3H3Q8IXZ2 948 aaKnown RBP6.08□□□□□ -1.44
SIK3-208ENST00000472648 SLC34A3Q8N130 599 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 KCTD17Q8N5Z5 321 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 IL22RA1Q8N6P7 574 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.08□□□□□ -1.44
SIK3-208ENST00000472648 MARVELD3Q96A59 401 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 JAKMIP2Q96AA8 810 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 HVCN1Q96D96 273 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 TNIP3Q96KP6 325 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 TMEM74Q96NL1 305 aa6.08□□□□□ -1.44
SIK3-208ENST00000472648 GFM1Q96RP9 751 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms