RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
PCOLCE-205ENST00000472348 TMPRSS4Q9NRS4 437 aa16.53■□□□□ 0.24
PCOLCE-205ENST00000472348 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
PCOLCE-205ENST00000472348 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 ILVBLA1L0T0 632 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 CTAGE9A4FU28 777 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 DCLK1O15075 740 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 NCAM2O15394 837 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 CREB3O43889 395 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 KRT1P04264 644 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 GOT1P17174 413 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 NR2C2P49116 596 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 NDST2P52849 883 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 ZNF33AQ06730 810 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 PAFAH1B3Q15102 231 aaKnown RBP16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 C6orf118Q5T5N4 469 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 SPOCD1Q6ZMY3 1216 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 DDI1Q8WTU0 396 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 MAIP1Q8WWC4 291 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 BBS2Q9BXC9 721 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 WNT16Q9UBV4 365 aa16.52■□□□□ 0.24
PCOLCE-205ENST00000472348 hCG_1818297A0A087WSY0 165 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 DAPK3O43293 454 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TJP3O95049 919 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 PYGMP11217 842 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TYRP14679 529 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 ERCC2P18074 760 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TGM2P21980 687 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 GJA4P35212 333 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 MARCKSL1P49006 195 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 ZNF177Q13360 481 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TUBB2AQ13885 445 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 GRM2Q14416 872 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 ZFYVE27Q5T4F4 411 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 SEL1L2Q5TEA6 688 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 AFMIDQ63HM1 303 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 RFWD3Q6PCD5 774 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 MFSD7Q6UXD7 560 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 NUDT18Q6ZVK8 323 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 BBS12Q6ZW61 710 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 PCDH19Q8TAB3 1148 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 WDR24Q96S15 920 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 NAP1L3Q99457 506 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 TUBB2BQ9BVA1 445 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 MAK16Q9BXY0 300 aaKnown RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 FRMD8P1Q9BZ68 369 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 OSBPL8Q9BZF1 889 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 MAGEH1Q9H213 219 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 EBF3Q9H4W6 596 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 GPATCH2LQ9NWQ4 482 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 KIAA1522Q9P206 1035 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 MIA3Q5JRA6 1907 aa16.51■□□□□ 0.23
PCOLCE-205ENST00000472348 NUP205Q92621 2012 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 TBL1XO60907 577 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 RPS24P62847 133 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 PRKCQQ04759 706 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 EIF4HQ15056 248 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 GAB4Q2WGN9 574 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 PARP15Q460N3 678 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 DCAF12L1Q5VU92 463 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 GJD3Q8N144 294 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 WFIKKN2Q8TEU8 576 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 RSAD2Q8WXG1 361 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 FATE1Q969F0 183 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 BRD8Q9H0E9 1235 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 PACSIN2Q9UNF0 486 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 SAR1BQ9Y6B6 198 aa16.5■□□□□ 0.23
PCOLCE-205ENST00000472348 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 APOC4-APOC2K7ER74 178 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 MAN2B1O00754 1011 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 KCNK3O14649 394 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 TRDMT1O14717 391 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 TIMM44O43615 452 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 APOC2P02655 101 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 ATP1A1P05023 1023 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 CD48P09326 243 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 ARSAP15289 507 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 SP100P23497 879 aaPredicted RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 OR1E1P30953 314 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 KLF1Q13351 362 aaPredicted RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 CDH18Q13634 790 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 ANO4Q32M45 955 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 ALFQ53S48 1182 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 TRIM68Q6AZZ1 485 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 CXorf57Q6NSI4 855 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 RWDD4Q6NW29 188 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 TPGS1Q6ZTW0 290 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
PCOLCE-205ENST00000472348 MFN1Q8IWA4 741 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms