RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RTL3Q8N8U3 475 aaKnown RBP17.34■□□□□ 0.37
CCM2-205ENST00000472223 TTC8Q8TAM2 541 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 MAIP1Q8WWC4 291 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 ZNF592Q92610 1267 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 ASIC4Q96FT7 647 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 MSANTD3Q96H12 275 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 PRICKLE1Q96MT3 831 aaPredicted RBP17.34■□□□□ 0.37
CCM2-205ENST00000472223 PSMB7Q99436 277 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 NAP1L3Q99457 506 aaPredicted RBP17.34■□□□□ 0.37
CCM2-205ENST00000472223 OSBPL8Q9BZF1 889 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 HPS4Q9NQG7 708 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 SLC2A4RGQ9NR83 387 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 TMEM248Q9NWD8 314 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
CCM2-205ENST00000472223 DEC1Q9P2X7 70 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 TCF20Q9UGU0 1960 aaKnown RBP17.34■□□□□ 0.37
CCM2-205ENST00000472223 EFR3BQ9Y2G0 817 aa17.34■□□□□ 0.37
CCM2-205ENST00000472223 WASH4PA8MWX3 477 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 CEP104O60308 925 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 PENKP01210 267 aaPredicted RBP17.33■□□□□ 0.36
CCM2-205ENST00000472223 ATP1A1P05023 1023 aaKnown RBP17.33■□□□□ 0.36
CCM2-205ENST00000472223 PYGMP11217 842 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 AMPD1P23109 780 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 HOXC13P31276 330 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 CDKN2BP42772 138 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 MMRN1Q13201 1228 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 ZNF211Q13398 564 aaPredicted RBP17.33■□□□□ 0.36
CCM2-205ENST00000472223 SLC12A1Q13621 1099 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 ZNF783Q6ZMS7 281 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 NYAP1Q6ZVC0 841 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 RNF135Q8IUD6 432 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 UBALD2Q8IYN6 164 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 NAT16Q8N8M0 369 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 TSC1Q92574 1164 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 ALG3Q92685 438 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 WDR24Q96S15 920 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 MUC3BQ9H195 1237 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 ARHGEF4Q9NR80 690 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 DNAJC17Q9NVM6 304 aaKnown RBP17.33■□□□□ 0.36
CCM2-205ENST00000472223 FBXL21Q9UKT6 434 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 HPCAL4Q9UM19 191 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 SNX12Q9UMY4 172 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 SAR1BQ9Y6B6 198 aa17.33■□□□□ 0.36
CCM2-205ENST00000472223 DOCK4Q8N1I0 1966 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 ESPNB1AK53 854 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 CACNG3O60359 315 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 CST8O60676 142 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 RAMP2O60895 175 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 CNTN5O94779 1100 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 PRLRP16471 622 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 HOXD9P28356 352 aaPredicted RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 GJA4P35212 333 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 DGKGP49619 791 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 SGSHP51688 502 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 DPYSQ14117 519 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 E2F5Q15329 346 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 ALFQ53S48 1182 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 GRAMD4Q6IC98 578 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 RALGPS2Q86X27 583 aaPredicted RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 SUGP1Q8IWZ8 645 aaKnown RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 KIF18AQ8NI77 898 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 FAF2Q96CS3 445 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 OSBPL9Q96SU4 736 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 HEMGNQ9BXL5 484 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 KIF26AQ9ULI4 1882 aaPredicted RBP17.32■□□□□ 0.36
CCM2-205ENST00000472223 MYOFQ9NZM1 2061 aa17.32■□□□□ 0.36
CCM2-205ENST00000472223 hCG_1818297A0A087WSY0 165 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 ARHGAP42A6NI28 874 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 C3orf70A6NLC5 250 aaPredicted RBP17.31■□□□□ 0.36
CCM2-205ENST00000472223 GFRA2O00451 464 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 CES2O00748 559 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 KRT10P13645 584 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 MX2P20592 715 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 IL4RP24394 825 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 CXCR5P32302 372 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 PTPN7P35236 360 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 EIF2DP41214 584 aaKnown RBP17.31■□□□□ 0.36
CCM2-205ENST00000472223 PAFAH1B1P43034 410 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 NDST2P52849 883 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 YBEYP58557 167 aaPredicted RBP17.31■□□□□ 0.36
CCM2-205ENST00000472223 DYNLT1P63172 113 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 POLD3Q15054 466 aaPredicted RBP17.31■□□□□ 0.36
CCM2-205ENST00000472223 TTC13Q8NBP0 860 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 PCDH19Q8TAB3 1148 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 P3H4Q92791 437 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 SHDQ96IW2 340 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 PNKPQ96T60 521 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 FERMT1Q9BQL6 677 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 MAGEH1Q9H213 219 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 TBC1D30Q9Y2I9 924 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 RAD54BQ9Y620 910 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 PIAS3Q9Y6X2 628 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 TICRRQ7Z2Z1 1910 aa17.31■□□□□ 0.36
CCM2-205ENST00000472223 ILVBLA1L0T0 632 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 ARNTLO00327 626 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms