RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	GDA	Q9Y2T3	454 aa		4.25	□□□□□ -1.73
PTCD3-209	ENST00000472044	AFG3L2	Q9Y4W6	797 aa		4.25	□□□□□ -1.73
PTCD3-209	ENST00000472044	MCIDAS	D6RGH6	385 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	DSCR3	O14972	297 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	DHX16	O60231	1041 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	USP12	O75317	370 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	METTL18	O95568	372 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	PRKCG	P05129	697 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	AKR1A1	P14550	325 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ARSA	P15289	507 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	HOXB9	P17482	250 aa	Predicted RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	XBP1	P17861	261 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	CD53	P19397	219 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	PRPH2	P23942	346 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	DDIT3	P35638	169 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	RPS6KA3	P51812	740 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MVD	P53602	400 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	TBL3	Q12788	808 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MAPK7	Q13164	816 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ALKBH1	Q13686	389 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	SEC23B	Q15437	767 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ANXA2R	Q3ZCQ2	193 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MEX3C	Q5U5Q3	659 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	LIPM	Q5VYY2	423 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	NAA35	Q5VZE5	725 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MTFR2	Q6P444	385 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	SYNE3	Q6ZMZ3	975 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	RBM44	Q6ZP01	1051 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ZNF788	Q6ZQV5	615 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	RTL10	Q7L3V2	364 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	UBE2Q1	Q7Z7E8	422 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	RHPN2	Q8IUC4	686 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	SCN4B	Q8IWT1	228 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ESX1	Q8N693	406 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ANKRD44	Q8N8A2	993 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ZFPM2	Q8WW38	1151 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	HTRA1	Q92743	480 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	RBM17	Q96I25	401 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	FCRL5	Q96RD9	977 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ZNF347	Q96SE7	839 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	ABHD14A	Q9BUJ0	271 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MRI	Q9BWK5	157 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	TM2D2	Q9BX73	214 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	GPR63	Q9BZJ6	419 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	CLPB	Q9H078	707 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	MLXIPL	Q9NP71	852 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	THAP1	Q9NVV9	213 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	IFT80	Q9P2H3	777 aa	Predicted RBP	4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	DTX4	Q9Y2E6	619 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	PKP3	Q9Y446	797 aa		4.24	□□□□□ -1.73
PTCD3-209	ENST00000472044	WIPF3	A6NGB9	483 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	KCNJ18	B7U540	433 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	SH3BP5	O60239	455 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	RNF8	O76064	485 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	NUDT3	O95989	172 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	PKM	P14618	531 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	BMP5	P22003	454 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	RPS6KB1	P23443	525 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	AVPR2	P30518	371 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	PSMC2	P35998	433 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	TUB	P50607	506 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	OAZ1	P54368	228 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	HSF1	Q00613	529 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	B4GALNT1	Q00973	533 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	RETSAT	Q6NUM9	610 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	DHRS13	Q6UX07	377 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	MDGA2	Q7Z553	956 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	GALNT7	Q86SF2	657 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	TMEM200A	Q86VY9	491 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	TSPYL6	Q8N831	410 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	FAM47B	Q8NA70	645 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	TEX19	Q8NA77	164 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	MAP4K1	Q92918	833 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	SH3KBP1	Q96B97	665 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	EFHD1	Q9BUP0	239 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	HDHD5	Q9BXW7	423 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	TAOK3	Q9H2K8	898 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	UBN1	Q9NPG3	1134 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	KL	Q9UEF7	1012 aa		4.23	□□□□□ -1.73
PTCD3-209	ENST00000472044	KLK10	O43240	276 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	ANP32C	O43423	234 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	PLAU	P00749	431 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	TUBB4A	P04350	444 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	CPA1	P15085	419 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	HOXA7	P31268	230 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	SLC10A2	Q12908	348 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	FOXF2	Q12947	444 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	VWA5B1	Q5TIE3	1220 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	LRRC8D	Q7L1W4	858 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	RD3	Q7Z3Z2	195 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	ADGRG3	Q86Y34	549 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	OSR1	Q8TAX0	266 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	PIGK	Q92643	395 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	KCNJ9	Q92806	393 aa		4.22	□□□□□ -1.73

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