RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PDGFRAP16234 1089 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 POLR2EP19388 210 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 GNA15P30679 374 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 SLC11A2P49281 568 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 KLK7P49862 253 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 ATXN3P54252 364 aaPredicted RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 GALCP54803 685 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 YWHAZP63104 245 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 RING1Q06587 406 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 PDCLQ13371 301 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 EIF4HQ15056 248 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 TRIP6Q15654 476 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 HNRNPA1L2Q32P51 320 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 DPCR1Q3MIW9 517 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 POM121L1PQ3SYA9 428 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 PTPN20Q4JDL3 420 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 MIIPQ5JXC2 388 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 WDR45BQ5MNZ6 344 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 TRNP1Q6NT89 227 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 FBXL22Q6P050 247 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 FAM183BPQ6ZVS7 135 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 MMAAQ8IVH4 418 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 STK40Q8N2I9 435 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 AADATQ8N5Z0 425 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 C1orf131Q8NDD1 294 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 CADM4Q8NFZ8 388 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 PTPRN2Q92932 1015 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 AZIN2Q96A70 460 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 ALG14Q96F25 216 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 CCDC34Q96HJ3 373 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 SLC2A13Q96QE2 648 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 DNAI2Q9GZS0 605 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 TM9SF3Q9HD45 589 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 SAMSN1Q9NSI8 373 aaKnown RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 DNAJC12Q9UKB3 198 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 TLR6Q9Y2C9 796 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 CA5BQ9Y2D0 317 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 CEP192Q8TEP8 1941 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 A0A1W2PP55 124 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 H0Y8X5 98 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 K7ERQ8 282 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 LUC7L3O95232 432 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 GJB6O95452 261 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SEMA4FO95754 770 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 LATS1O95835 1130 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 FTH1P19P0C7X4 201 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 ACADMP11310 421 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 OXTRP30559 389 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 HOXD12P35452 270 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 ARID5AQ03989 594 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SHBQ15464 509 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 TAF3Q5VWG9 929 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 OR6B2Q6IFH4 312 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 CXorf57Q6NSI4 855 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 NCEH1Q6PIU2 408 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 FOXR2Q6PJQ5 311 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 DBX2Q6ZNG2 339 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 RAB44Q7Z6P3 723 aaPredicted RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 CHSY1Q86X52 802 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 NAXDQ8IW45 347 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 AHI1Q8N157 1196 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 CCAR2Q8N163 923 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 HDDC3Q8N4P3 179 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 HJURPQ8NCD3 748 aaPredicted RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 WFIKKN2Q8TEU8 576 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SETD7Q8WTS6 366 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 FRS2Q8WU20 508 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SHC3Q92529 594 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 FOXJ1Q92949 421 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 PPP1R13BQ96KQ4 1090 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 SLC6A18Q96N87 628 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 RSPH9Q9H1X1 276 aaPredicted RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 PABPC3Q9H361 631 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 FBXL12Q9NXK8 326 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 PCOLCE2Q9UKZ9 415 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 ACTL7AQ9Y615 435 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 HS3ST4Q9Y661 456 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 GOLGA4Q13439 2230 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 CKAP5Q14008 2032 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 MUC22E2RYF6 1773 aaPredicted RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
USP48-207ENST00000471752 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
USP48-207ENST00000471752 FAM149AA5PLN7 773 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SRRM3A6NNA2 597 aaPredicted RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 H0Y626 953 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 CAPN9O14815 690 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 NPC1O15118 1278 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 EPHB6O15197 1021 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SMAD6O43541 496 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms