RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 B4GALNT4Q76KP1 1039 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 GLIS1Q8NBF1 620 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 KCTD6Q8NC69 237 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 ATG4AQ8WYN0 398 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 IRF7Q92985 503 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 TBC1D31Q96DN5 1066 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 MYO19Q96H55 970 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 GCNAQ96QF7 691 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 FAM118BQ9BPY3 351 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 GORASP1Q9BQQ3 440 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 ACE2Q9BYF1 805 aaPredicted RBP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 DCLK3Q9C098 648 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 PDFQ9HBH1 243 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 SPHK2Q9NRA0 654 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 ACTL7AQ9Y615 435 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 RNF103O00237 685 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CHADO15335 359 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CREB3O43889 395 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 MAFKO60675 156 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CST8O60676 142 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 MAP3K6O95382 1288 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 FGGP02679 453 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 TUBB4AP04350 444 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ASGR2P07307 311 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 VAV1P15498 845 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 TCP1P17987 556 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 GLDCP23378 1020 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 SP100P23497 879 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 IVDP26440 423 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 EPHB2P29323 1055 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 HLA-FP30511 346 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CD70P32970 193 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 HTR7P34969 479 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ACVRL1P37023 503 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 SLC11A2P49281 568 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 HARS2P49590 506 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 GALNT2Q10471 571 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 FZD5Q13467 585 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 NOMO1Q15155 1222 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 AAK1Q2M2I8 961 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ARL13BQ3SXY8 428 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 EFHC2Q5JST6 749 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 EP400NLQ6ZTU2 488 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 PRUNE1Q86TP1 453 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ADIPOR2Q86V24 386 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 DDX42Q86XP3 938 aaKnown RBP eCLIP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CCDC33Q8N5R6 958 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CNTD1Q8N815 330 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 C12orf50Q8NA57 414 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 TDRD5Q8NAT2 981 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 FIBINQ8TAL6 211 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ARHGEF2Q92974 986 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 RBM41Q96IZ5 413 aaKnown RBP10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ZYG11BQ9C0D3 744 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 EBF3Q9H4W6 596 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ECT2Q9H8V3 914 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 ZFP14Q9HCL3 533 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 TRPV5Q9NQA5 729 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 PLK2Q9NYY3 685 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 GTSE1Q9NYZ3 720 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 CHD5Q8TDI0 1954 aa10.17□□□□□ -0.78
SF3A1-207ENST00000471342 PRRT4C9JH25 899 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 EEF2KO00418 725 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 MUSKO15146 869 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 LIASO43766 372 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CEP104O60308 925 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CACNG3O60359 315 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 APOEP02649 317 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 PSMC3P17980 439 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 GBP2P32456 591 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 SSR1P43307 286 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 ZNF135P52742 658 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 GDF10P55107 478 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CDH4P55283 916 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 ARF5P84085 180 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 WASHC5Q12768 1159 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 LMAN2Q12907 356 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 PRKD1Q15139 912 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 DRICH1Q6PGQ1 229 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CHST9Q7L1S5 443 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 OTOP3Q7RTS5 596 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 TFAP2DQ7Z6R9 452 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 ADAT2Q7Z6V5 191 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CHSY1Q86X52 802 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 KLHDC8BQ8IXV7 354 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 APCDD1Q8J025 514 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 UBL4BQ8N7F7 174 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 NOA1Q8NC60 698 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 OR7D4Q8NG98 312 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 ACTL9Q8TC94 416 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 DEPDC1BQ8WUY9 529 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms