RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 KCNJ1P48048 391 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 NDST2P52849 883 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 OXCT1P55809 520 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 GUCY2DQ02846 1103 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 GBE1Q04446 702 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 CDH18Q13634 790 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 POLD3Q15054 466 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 ELF2Q15723 593 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 PARP15Q460N3 678 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 SLC45A4Q5BKX6 768 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 FAM133BQ5BKY9 247 aaKnown RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 NADSYN1Q6IA69 706 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 TIGD7Q6NT04 549 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 C4orf22Q6V702 233 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 Q6ZNB5 142 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 CHST9Q7L1S5 443 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 JAMLQ86YT9 394 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 YAF2Q8IY57 180 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 CPXM2Q8N436 756 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 KIAA1958Q8N8K9 716 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 BBOF1Q8ND07 529 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 SLC35B2Q8TB61 432 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 GBF1Q92538 1859 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 FGF13Q92913 245 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 SMARCD2Q92925 531 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 IGSF8Q969P0 613 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 CELF6Q96J87 481 aaKnown RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 TMEM121Q9BTD3 319 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 ETNK2Q9NVF9 386 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 TMEM248Q9NWD8 314 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 STOML2Q9UJZ1 356 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 ZFP37Q9Y6Q3 630 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 PDE4DIPQ5VU43 2346 aa10.02□□□□□ -0.8
CCM2-204ENST00000470837 BCLAF3A2AJT9 711 aaKnown RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 TRDMT1O14717 391 aaKnown RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 SCAMP3O14828 347 aaKnown RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 CTIFO43310 598 aaKnown RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 ERLIN1O75477 346 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 KRT14P02533 472 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 RHOCP08134 193 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 TCF3P15923 654 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 SLC6A4P31645 630 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 IFNAR2P48551 515 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 YBEYP58557 167 aaPredicted RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 HLTFQ14527 1009 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCM2-204ENST00000470837 ANO4Q32M45 955 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 MAP9Q49MG5 647 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 MPP7Q5T2T1 576 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 TTC27Q6P3X3 843 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 TPGS1Q6ZTW0 290 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 SETD3Q86TU7 594 aaPredicted RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 BBS7Q8IWZ6 715 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 CFAP52Q8N1V2 620 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 UMODL1-AS1Q8N2C9 162 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 ALLCQ8N6M5 410 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 FAM71DQ8N9W8 422 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 SLCO2A1Q92959 643 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 ZSWIM3Q96MP5 696 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 QKIQ96PU8 341 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCM2-204ENST00000470837 ERP44Q9BS26 406 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 TRIM31Q9BZY9 425 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 MUC3BQ9H195 1237 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 SP110Q9HB58 689 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 ZFP14Q9HCL3 533 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 EPB41L5Q9HCM4 733 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 FAM114A2Q9NRY5 505 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 OBP2AQ9NY56 170 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 CLEC1BQ9P126 229 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 CD207Q9UJ71 328 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 CCL26Q9Y258 94 aa10.02□□□□□ -0.81
CCM2-204ENST00000470837 COL4A4P53420 1690 aaPredicted RBP10.02□□□□□ -0.81
CCM2-204ENST00000470837 RASA4BC9J798 803 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 RASA4O43374 803 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 TBX10O75333 385 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 CNTN5O94779 1100 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 PRAMEF12O95522 483 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 ADH1CP00326 375 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 FOSL2P15408 326 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 RBL1P28749 1068 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 GARSP41250 739 aaKnown RBP10.01□□□□□ -0.81
CCM2-204ENST00000470837 RPS24P62847 133 aaKnown RBP10.01□□□□□ -0.81
CCM2-204ENST00000470837 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
CCM2-204ENST00000470837 ZNF33AQ06730 810 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 GALNT2Q10471 571 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 USP4Q13107 963 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 CUL1Q13616 776 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 PTK6Q13882 451 aa10.01□□□□□ -0.81
CCM2-204ENST00000470837 ADGRE1Q14246 886 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms