RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 MEI4A8MW99 385 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 TTC34A8MYJ7 566 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 GOLGA8SH3BPF8 625 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 PAGE1O75459 146 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 ADCY5O95622 1261 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 CDK11BP21127 795 aaKnown RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 GGCXP38435 758 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 SULT1E1P49888 294 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 IRAK1P51617 712 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 JAM2P57087 298 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 NOMO3P69849 1222 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 CENPCQ03188 943 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 AUHQ13825 339 aaKnown RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 SYCP1Q15431 976 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 HNRNPA1L2Q32P51 320 aaKnown RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 N4BP2L1Q5TBK1 243 aaPredicted RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 NAA35Q5VZE5 725 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 C14orf80Q86SX3 495 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 NT5C3BQ969T7 300 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 RPL10LQ96L21 214 aaKnown RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 RPRD1AQ96P16 312 aaPredicted RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 TBCBQ99426 244 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 GTPBP2Q9BX10 602 aaKnown RBP16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 SLCO3A1Q9UIG8 710 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 VANGL2Q9ULK5 521 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 HS3ST4Q9Y661 456 aa16.91■□□□□ 0.3
GTF3C2-209ENST00000470115 A0A1B0GVM2 712 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 TCAF2A6NFQ2 919 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 METTL12A8MUP2 240 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SIN3BO75182 1162 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 DNTTP04053 509 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SRPRAP08240 638 aaKnown RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 C7P10643 843 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 PDGFRAP16234 1089 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 CHRNB2P17787 502 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 MZF1P28698 734 aaPredicted RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 ACSL1P33121 698 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SOX5P35711 763 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SCNN1AP37088 669 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 CXCR3P49682 368 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 UBXN1Q04323 297 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SLC12A1Q13621 1099 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 NCAPHQ15003 741 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 TTC39BQ5VTQ0 682 aaPredicted RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 DCAF12L1Q5VU92 463 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 ZNF776Q68DI1 518 aaPredicted RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 ZNF677Q86XU0 584 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 DHX40Q8IX18 779 aaKnown RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 KDM1BQ8NB78 822 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 MSANTD4Q8NCY6 345 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 DNASE2BQ8WZ79 361 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 WDCPQ9H6R7 721 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 ANLNQ9NQW6 1124 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 TMEM63CQ9P1W3 806 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
GTF3C2-209ENST00000470115 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 LGALS16A8MUM7 142 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ARHGAP33O14559 1287 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 GIPC1O14908 333 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 GNSP15586 552 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ZNF18P17022 549 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 FLT3P36888 993 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 STK19P49842 368 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 NOVA1P51513 510 aaKnown RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ATXN3P54252 364 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 FMO1Q01740 532 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 CDR2Q01850 454 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 TYRO3Q06418 890 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 MTA1Q13330 715 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ARID5BQ14865 1188 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 C9orf64Q5T6V5 341 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 SH3PXD2AQ5TCZ1 1133 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 PSAPL1Q6NUJ1 521 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 OR2I1PQ8NGU4 316 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 PGAP3Q96FM1 320 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 TKTL2Q9H0I9 626 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 MIR1-1HGQ9H1L0 117 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 RSPH9Q9H1X1 276 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 C6orf106Q9H6K1 298 aaPredicted RBP16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ARHGEF38Q9NXL2 777 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 SNX10Q9Y5X0 201 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 ADAMTS9Q9P2N4 1935 aa16.89■□□□□ 0.29
GTF3C2-209ENST00000470115 NUMA1Q14980 2115 aa16.88■□□□□ 0.29
GTF3C2-209ENST00000470115 ASCC3Q8N3C0 2202 aaKnown RBP16.88■□□□□ 0.29
GTF3C2-209ENST00000470115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms