RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 KIAA0895LQ68EN5 471 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 GBP6Q6ZN66 633 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 MMS22LQ6ZRQ5 1243 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.48
COL7A1-208ENST00000470076 PNPLA1Q8N8W4 532 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 ATP6V0D2Q8N8Y2 350 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 BAHD1Q8TBE0 780 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-208ENST00000470076 CDC6Q99741 560 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 CRACR2AQ9BSW2 395 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 ACP6Q9NPH0 428 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 KIAA1468Q9P260 1216 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 APEX2Q9UBZ4 518 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 CEP83Q9Y592 693 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 SNX11Q9Y5W9 270 aa18.08■□□□□ 0.48
COL7A1-208ENST00000470076 EDDM13A0A1B0GTR0 161 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 BECN2A8MW95 431 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 KCNU1A8MYU2 1149 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 F5H5T6 163 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 GLI1P08151 1106 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 SLC2A3P11169 496 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 USP8P40818 1118 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 EIF4EBP2Q13542 120 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-208ENST00000470076 SLC12A1Q13621 1099 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 C9orf64Q5T6V5 341 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 TTC39BQ5VTQ0 682 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-208ENST00000470076 GJB7Q6PEY0 223 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 RHBDD1Q8TEB9 315 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 IGSF8Q969P0 613 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 ADAMTS1Q9UHI8 967 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 FZD4Q9ULV1 537 aa18.07■□□□□ 0.48
COL7A1-208ENST00000470076 NYNRINQ9P2P1 1898 aaKnown RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 GTPBP10A4D1E9 387 aaKnown RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 LRRC72A6NJI9 287 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 TTC34A8MYJ7 566 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 MID1O15344 667 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 IGHV4-34P06331 123 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 SLC9A1P19634 815 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 NNMTP40261 264 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 CTSOP43234 321 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 GALCP54803 685 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 RACK1P63244 317 aaKnown RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 CDK17Q00537 523 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 ARHGAP44Q17R89 818 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 EFHC1Q5JVL4 640 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 ADAT2Q7Z6V5 191 aaKnown RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 SLCO6A1Q86UG4 719 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 CREBRFQ8IUR6 639 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 MMAAQ8IVH4 418 aaKnown RBP18.06■□□□□ 0.48
COL7A1-208ENST00000470076 APCDD1Q8J025 514 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 SHC3Q92529 594 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 OMDQ99983 421 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 ORAI3Q9BRQ5 295 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 FAM204AQ9H8W3 233 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 ASNSD1Q9NWL6 643 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 SLCO3A1Q9UIG8 710 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 PCDHGC3Q9UN70 934 aa18.06■□□□□ 0.48
COL7A1-208ENST00000470076 PTPRBP23467 1997 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 A0A1W2PP55 124 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 A0A1W2PPC4 97 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 FAM47DPA6NHR8 397 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 DFNA5O60443 496 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 HSF2BPO75031 334 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 RNASEH2AO75792 299 aaKnown RBP18.05■□□□□ 0.48
COL7A1-208ENST00000470076 ABCB4P21439 1286 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 CCR1P32246 355 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 SLC8A1P32418 973 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 CTSKP43235 329 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 CCT8P50990 548 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 OXCT1P55809 520 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 PITX1P78337 314 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-208ENST00000470076 SULT2A1Q06520 285 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 MTA1Q13330 715 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 TAF5Q15542 800 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 RABGAP1LQ5R372 815 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 DEFB106AQ8N104 65 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 CCAR2Q8N163 923 aaKnown RBP18.05■□□□□ 0.48
COL7A1-208ENST00000470076 WDTC1Q8N5D0 677 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 OR2T34Q8NGX1 318 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 PPP1R13BQ96KQ4 1090 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 SLC2A13Q96QE2 648 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 CPXM1Q96SM3 734 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 FAM129BQ96TA1 746 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 PRMT1Q99873 361 aaKnown RBP18.05■□□□□ 0.48
COL7A1-208ENST00000470076 ACE2Q9BYF1 805 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-208ENST00000470076 NEUROG2Q9H2A3 272 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 DDIT4Q9NX09 232 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 SERGEFQ9UGK8 458 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
COL7A1-208ENST00000470076 TP53BP1Q12888 1972 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PLXNB3Q9ULL4 1909 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 A0A1B0GVM2 712 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 TCAF2A6NFQ2 919 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 VILLO15195 856 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PCDHGA12O60330 932 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 ADH1BP00325 375 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 C5AR1P21730 350 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms