RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 PIGRP01833 764 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ITGA2BP08514 1039 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ACAT1P24752 427 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 L1CAMP32004 1257 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 BMPR1AP36894 532 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 COPAP53621 1224 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 EIF3EP60228 445 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 BASP1P80723 227 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 MRPS6P82932 125 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SP4Q02446 784 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CES4AQ5XG92 561 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SLFN12LQ6IEE8 588 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 B3GNT6Q6ZMB0 384 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 TIFABQ6ZNK6 161 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM126BQ8IUX1 230 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 GJD3Q8N144 294 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PCYT2Q99447 389 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CGRRF1Q99675 332 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 GALNT8Q9NY28 637 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SLC9A2Q9UBY0 812 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ADAMTS6Q9UKP5 1117 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 FAM50BQ9Y247 325 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 HCN4Q9Y3Q4 1203 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PTPRJQ12913 1337 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ARHGAP42A6NI28 874 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ENPP3O14638 875 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 DGAT1O75907 488 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 RBP3P10745 1247 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ETS2P15036 469 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 IL9P15248 144 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PRDX6P30041 224 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 MAGEA6P43360 314 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 LIG4P49917 911 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SERPINB9P50453 376 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 AP3M2P53677 418 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 AQP4P55087 323 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 DYNLT1P63172 113 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 DLG1Q12959 904 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ACAP1Q15027 740 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 HSP90AA5PQ58FG0 334 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 OGFRL1Q5TC84 451 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 KLC3Q6P597 504 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PLPPR4Q7Z2D5 763 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SATL1Q86VE3 508 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CMTR2Q8IYT2 770 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PPM1NQ8N819 430 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 FAM71DQ8N9W8 422 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ICA1LQ8NDH6 482 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PIWIL2Q8TC59 973 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PYDC1Q8WXC3 89 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ACSF2Q96CM8 615 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 ZFRQ96KR1 1074 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 MECRQ9BV79 373 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 FTHL17Q9BXU8 183 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 NRDE2Q9H7Z3 1164 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 PREBQ9HCU5 417 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 JPH1Q9HDC5 661 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 SAE1Q9UBE0 346 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 AGO2Q9UKV8 859 aaKnown RBP9.84□□□□□ -0.83
HDAC3-205ENST00000469550 CDY2AQ9Y6F7 541 aa9.84□□□□□ -0.83
HDAC3-205ENST00000469550 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 LRCH4O75427 683 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 DGKIO75912 1065 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 STBD1O95210 358 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CCNE2O96020 404 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 FAM200BP0CF97 657 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 SMIM18P0DKX4 95 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 PSMA2P25787 234 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CNTFP26441 200 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CTNNB1P35222 781 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 WNT7BP56706 349 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 NLRP11P59045 1033 aaKnown RBP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 SLC25A3Q00325 362 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CREB5Q02930 508 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 UBAP2LQ14157 1087 aaKnown RBP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 MDH1BQ5I0G3 518 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 LPCAT4Q643R3 524 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 LMBRD2Q68DH5 695 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-205ENST00000469550 BORAQ6PGQ7 559 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CYS1Q717R9 158 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 WDTC1Q8N5D0 677 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 SLC25A41Q8N5S1 370 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 ARFGAP1Q8N6T3 406 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 SLC26A7Q8TE54 656 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 DNAJB3Q8WWF6 145 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 LINC01599Q8WXQ3 324 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CMTM5Q96DZ9 223 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 MPP4Q96JB8 637 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 CEP170P1Q96L14 293 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 C20orf27Q9GZN8 174 aa9.83□□□□□ -0.84
HDAC3-205ENST00000469550 Q9H521 79 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms