RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 GTF2H1P32780 548 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 CTSOP43234 321 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 ME1P48163 572 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 PPP2CBP62714 309 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 RPS24P62847 133 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 PPP2CAP67775 309 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 E2F1Q01094 437 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 NFIL3Q16649 462 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 FSCBQ5H9T9 825 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 NUGGCQ68CJ6 796 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 NADSYN1Q6IA69 706 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 NAPEPLDQ6IQ20 393 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 UNC45BQ8IWX7 931 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 CARNMT1Q8N4J0 409 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 HJURPQ8NCD3 748 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 ZNF248Q8NDW4 579 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 WBP1Q96G27 269 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 HIC2Q96JB3 615 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 SLCO3A1Q9UIG8 710 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 MYO18BQ8IUG5 2567 aa13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 TP53BP1Q12888 1972 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-216ENST00000469400 ATMQ13315 3056 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SPTA1P02549 2419 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3DA0A087WVF3 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3IA0A087WXS9 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3EA0A087X179 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3FA6NER0 549 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3LB9A6J9 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SDC3O75056 442 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 ADH1BP00325 375 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SRPRAP08240 638 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3HP0C7X1 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 PCBP4P57723 403 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TMPRSS3P57727 454 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 DAOAP59103 153 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 RHDQ02161 417 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 CDH18Q13634 790 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 FOXD4L5Q5VV16 416 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3GQ6DHY5 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3CQ6IPX1 549 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D3Q8IZP1 549 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 SCML4Q8N228 414 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 FBXL13Q8NEE6 735 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 FOXD4L4Q8WXT5 416 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 PTPRN2Q92932 1015 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 AZIN2Q96A70 460 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 ZNF578Q96N58 590 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 CNGB3Q9NQW8 809 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 RAB20Q9NX57 234 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 ARHGAP20Q9P2F6 1191 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 HESX1Q9UBX0 185 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 PCDHB1Q9Y5F3 818 aa13.28□□□□□ -0.28
TRAPPC12-216ENST00000469400 HECTD1Q9ULT8 2610 aa13.27□□□□□ -0.28
TRAPPC12-216ENST00000469400 GABBR2O75899 941 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 IL1BP01584 269 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MPOP05164 745 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 LCP1P13796 627 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 RPL13P26373 211 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MZF1P28698 734 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MAT2AP31153 395 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MXI1P50539 228 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 TBX4P57082 545 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 ECT2LQ008S8 904 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 ADAM9Q13443 819 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 PKDCCQ504Y2 493 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 BROXQ5VW32 411 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 CFAP52Q8N1V2 620 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 SLC25A45Q8N413 288 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 ITIH6Q6UXX5 1313 aa13.27□□□□□ -0.29
TRAPPC12-216ENST00000469400 TYW5A2RUC4 315 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 MAGEC1O60732 1142 aa13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 MOCS3O95396 460 aa13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 CD19P15391 556 aa13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 DRD3P35462 400 aa13.26□□□□□ -0.29
TRAPPC12-216ENST00000469400 METAP1P53582 386 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms