RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CCT8P50990 548 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 C21orf59P57076 290 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 RACK1P63244 317 aaKnown RBP12.7□□□□□ -0.38
HDAC3-204ENST00000469207 BNIP3Q12983 259 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 TAF5Q15542 800 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 TAC4Q86UU9 113 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 CIR1Q86X95 450 aaPredicted RBP12.7□□□□□ -0.38
HDAC3-204ENST00000469207 EHBP1Q8NDI1 1231 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 GOLGA1Q92805 767 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 PTPRN2Q92932 1015 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 FAM149B1Q96BN6 582 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 OMDQ99983 421 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 CAAP1Q9H8G2 361 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 TJP2Q9UDY2 1190 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 MAN1B1Q9UKM7 699 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 URB1O60287 2271 aaKnown RBP12.7□□□□□ -0.38
HDAC3-204ENST00000469207 BPTFQ12830 3046 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 VILLO15195 856 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 PAPSS1O43252 624 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 LUC7L3O95232 432 aaKnown RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 CDH18Q13634 790 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 ACAP1Q15027 740 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 USP30Q70CQ3 517 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 EID2Q8N6I1 236 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 OR14C36Q8NHC7 312 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
HDAC3-204ENST00000469207 AASDHPPTQ9NRN7 309 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 TLR6Q9Y2C9 796 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 CEP83Q9Y592 693 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 ATP6V1DQ9Y5K8 247 aa12.69□□□□□ -0.38
HDAC3-204ENST00000469207 APC2O95996 2303 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3DA0A087WVF3 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3EA0A087X179 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3KA0A087X1G2 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 A0A1W2PR77 199 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TARSL2A2RTX5 802 aaKnown RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3FA6NER0 549 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 C10orf142B7Z368 130 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3LB9A6J9 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 CAPN9O14815 690 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 RNASEH1O60930 286 aaKnown RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 FBXO21O94952 628 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SMC2O95347 1197 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 IL1BP01584 269 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 ASLP04424 464 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3HP0C7X1 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 KRT5P13647 590 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TACR2P21452 398 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 CD38P28907 300 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 RPL34P49207 117 aaKnown RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 STX17P56962 302 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 PPP2CBP62714 309 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 PPP2CAP67775 309 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 ECT2LQ008S8 904 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 APBA1Q02410 837 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3GQ6DHY5 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 GALNT15Q8N3T1 639 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SAP25Q8TEE9 199 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 DHTKD1Q96HY7 919 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SERPINB11Q96P15 392 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 ELF4Q99607 663 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 DDX50Q9BQ39 737 aaKnown RBP12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 FTSJ1Q9UET6 329 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SARDHQ9UL12 918 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 SCML1Q9UN30 329 aa12.68□□□□□ -0.38
HDAC3-204ENST00000469207 EDDM13A0A1B0GTR0 161 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 TYW5A2RUC4 315 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 LRRC72A6NJI9 287 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 E5RJQ4 531 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 BIN1O00499 593 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ENC1O14682 589 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 PMM2O15305 246 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 RTN2O75298 545 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 TRUB2O95900 331 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 ITGAVP06756 1048 aa12.67□□□□□ -0.38
HDAC3-204ENST00000469207 SRPRAP08240 638 aaKnown RBP12.67□□□□□ -0.38
HDAC3-204ENST00000469207 PDGFRAP16234 1089 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms