RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TSPAN3O60637 253 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 LATS1O95835 1130 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ETS1P14921 441 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 HOXB8P17481 243 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 IGFBP4P22692 258 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 RBL1P28749 1068 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 LTBRP36941 435 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 NRLP54845 237 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 GDF10P55107 478 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 RPS24P62847 133 aaKnown RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 LMNB2Q03252 620 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 XRCC4Q13426 336 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TRIP13Q15645 432 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TFAP2DQ7Z6R9 452 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 PRICKLE1Q96MT3 831 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ADAM7Q9H2U9 754 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 TMEM248Q9NWD8 314 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ZMYM5Q9UJ78 669 aa13.2□□□□□ -0.3
RUNX1-213ENST00000469087 ZFP37Q9Y6Q3 630 aaPredicted RBP13.2□□□□□ -0.3
RUNX1-213ENST00000469087 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 BCLAF3A2AJT9 711 aaKnown RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 GFRA2O00451 464 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 TBX10O75333 385 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 ZSCAN5DPP0CG00 497 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 FSHRP23945 695 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 ARHGAP12Q8IWW6 846 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 FGF13Q92913 245 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 P2RY11Q96G91 374 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 SLC39A8Q9C0K1 460 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 NOL6Q9H6R4 1146 aaKnown RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
RUNX1-213ENST00000469087 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
RUNX1-213ENST00000469087 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 SGK1O00141 431 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 GAS8O95995 478 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 SERPINB6P35237 376 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 VSNL1P62760 191 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 GALNT2Q10471 571 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 PDK1Q15118 436 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 SLC45A4Q5BKX6 768 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 AFMIDQ63HM1 303 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 NPAS3Q8IXF0 933 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 UMODL1-AS1Q8N2C9 162 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 CCNYQ8ND76 341 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
RUNX1-213ENST00000469087 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 SEC14L1Q92503 715 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 TMA16Q96EY4 203 aaKnown RBP13.18□□□□□ -0.3
RUNX1-213ENST00000469087 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 DDX50Q9BQ39 737 aaKnown RBP13.18□□□□□ -0.3
RUNX1-213ENST00000469087 GDF3Q9NR23 364 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 ZNF510Q9Y2H8 683 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 UTP11Q9Y3A2 253 aaKnown RBP13.18□□□□□ -0.3
RUNX1-213ENST00000469087 RAD54BQ9Y620 910 aa13.18□□□□□ -0.3
RUNX1-213ENST00000469087 HACD1B0YJ81 288 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 IFNB1P01574 187 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 KRT14P02533 472 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 IVDP26440 423 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 OR1E1P30953 314 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CDH4P55283 916 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 PTK6Q13882 451 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CASKIN2Q8WXE0 1202 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 RAB21Q9UL25 225 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 SNX24Q9Y343 169 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 DFFAO00273 331 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 NCAM2O15394 837 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 KCNN4O15554 427 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 VAV1P15498 845 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 TCF3P15923 654 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 WEE1P30291 646 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CHKAP35790 457 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 GARSP41250 739 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms