RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SNX1Q13596 522 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 CCDC137Q6PK04 289 aaKnown RBP18.01■□□□□ 0.47
RPL39-202ENST00000468844 CCDC33Q8N5R6 958 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 ST13P5Q8NFI4 369 aaPredicted RBP18.01■□□□□ 0.47
RPL39-202ENST00000468844 SLC35B2Q8TB61 432 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 SUSD6Q92537 303 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 MAGOHBQ96A72 148 aaKnown RBP18.01■□□□□ 0.47
RPL39-202ENST00000468844 DDX50Q9BQ39 737 aaKnown RBP18.01■□□□□ 0.47
RPL39-202ENST00000468844 TMEM248Q9NWD8 314 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 CD207Q9UJ71 328 aa18.01■□□□□ 0.47
RPL39-202ENST00000468844 TICRRQ7Z2Z1 1910 aa18■□□□□ 0.47
RPL39-202ENST00000468844 COL4A3Q01955 1670 aa18■□□□□ 0.47
RPL39-202ENST00000468844 WASH4PA8MWX3 477 aa18■□□□□ 0.47
RPL39-202ENST00000468844 TSPAN3O60637 253 aa18■□□□□ 0.47
RPL39-202ENST00000468844 CHRNA3P32297 505 aa18■□□□□ 0.47
RPL39-202ENST00000468844 KCNJ1P48048 391 aa18■□□□□ 0.47
RPL39-202ENST00000468844 NR2C2P49116 596 aa18■□□□□ 0.47
RPL39-202ENST00000468844 BYSLQ13895 437 aaKnown RBP18■□□□□ 0.47
RPL39-202ENST00000468844 OASLQ15646 514 aaKnown RBP18■□□□□ 0.47
RPL39-202ENST00000468844 KCTD19Q17RG1 926 aaPredicted RBP18■□□□□ 0.47
RPL39-202ENST00000468844 RABGAP1LQ5R372 815 aa18■□□□□ 0.47
RPL39-202ENST00000468844 CPXM2Q8N436 756 aa18■□□□□ 0.47
RPL39-202ENST00000468844 OLFM3Q96PB7 478 aa18■□□□□ 0.47
RPL39-202ENST00000468844 UBE2ZQ9H832 354 aaPredicted RBP18■□□□□ 0.47
RPL39-202ENST00000468844 HOMER3Q9NSC5 361 aa18■□□□□ 0.47
RPL39-202ENST00000468844 USP15Q9Y4E8 981 aaPredicted RBP18■□□□□ 0.47
RPL39-202ENST00000468844 KIAA1549LQ6ZVL6 1849 aa18■□□□□ 0.47
RPL39-202ENST00000468844 KCNA5P22460 613 aa18■□□□□ 0.47
RPL39-202ENST00000468844 SERPINB6P35237 376 aa18■□□□□ 0.47
RPL39-202ENST00000468844 CHKAP35790 457 aa18■□□□□ 0.47
RPL39-202ENST00000468844 COILP38432 576 aaPredicted RBP18■□□□□ 0.47
RPL39-202ENST00000468844 DRICH1Q6PGQ1 229 aaPredicted RBP18■□□□□ 0.47
RPL39-202ENST00000468844 ZC3H18Q86VM9 953 aaKnown RBP18■□□□□ 0.47
RPL39-202ENST00000468844 MMGT1Q8N4V1 131 aa18■□□□□ 0.47
RPL39-202ENST00000468844 NECTIN4Q96NY8 510 aa18■□□□□ 0.47
RPL39-202ENST00000468844 TRPV4Q9HBA0 871 aa18■□□□□ 0.47
RPL39-202ENST00000468844 AMACRQ9UHK6 382 aa18■□□□□ 0.47
RPL39-202ENST00000468844 EFCAB8A8MWE9 144 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 MCF2LO15068 1137 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 RBP3P10745 1247 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 GBP2P32456 591 aaPredicted RBP17.99■□□□□ 0.47
RPL39-202ENST00000468844 FNTAP49354 379 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 MRPS25P82663 173 aaKnown RBP17.99■□□□□ 0.47
RPL39-202ENST00000468844 TDRD5Q8NAT2 981 aaKnown RBP17.99■□□□□ 0.47
RPL39-202ENST00000468844 LRRN4Q8WUT4 740 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 PPM1EQ8WY54 764 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 NKD2Q969F2 451 aaPredicted RBP17.99■□□□□ 0.47
RPL39-202ENST00000468844 CELF6Q96J87 481 aaKnown RBP17.99■□□□□ 0.47
RPL39-202ENST00000468844 PCYOX1Q9UHG3 505 aa17.99■□□□□ 0.47
RPL39-202ENST00000468844 A0A1B0GVM2 712 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 TCAF2A6NFQ2 919 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 LAMP2P13473 410 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 EIF3EP60228 445 aaKnown RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 TPGS1Q6ZTW0 290 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 B4GALNT4Q76KP1 1039 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 ARHGAP12Q8IWW6 846 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 ANKRD7Q92527 254 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 BHMTQ93088 406 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 FRMD8P1Q9BZ68 369 aaPredicted RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 LINC00597Q9H2U6 94 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 NOL6Q9H6R4 1146 aaKnown RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 C10orf88Q9H8K7 445 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 WNT6Q9Y6F9 365 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 ANKRD36A6QL64 1941 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 F5P12259 2224 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 GRXCR2A6NFK2 248 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 OR1E1P30953 314 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 CDH4P55283 916 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 SKIV2LQ15477 1246 aaKnown RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 TEX35Q5T0J7 233 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 TTC39BQ5VTQ0 682 aaPredicted RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 TANGO2Q6ICL3 276 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 UMODL1-AS1Q8N2C9 162 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 LZTR1Q8N653 840 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 BPIFB1Q8TDL5 484 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 TMA16Q96EY4 203 aaKnown RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 TMEM121Q9BTD3 319 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 TBC1D14Q9P2M4 693 aa17.98■□□□□ 0.47
RPL39-202ENST00000468844 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPL39-202ENST00000468844 V9GYY5 206 aaPredicted RBP17.98■□□□□ 0.47
RPL39-202ENST00000468844 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 RAD51CO43502 376 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 TBL1XO60907 577 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 CLDN11O75508 207 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 MAPKAPK2P49137 400 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 AFMIDQ63HM1 303 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 C8orf74Q6P047 294 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 CHST9Q7L1S5 443 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 HJURPQ8NCD3 748 aaPredicted RBP17.97■□□□□ 0.47
RPL39-202ENST00000468844 FGF14Q92915 247 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 ASIC4Q96FT7 647 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 LGMNQ99538 433 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 LRRC1Q9BTT6 524 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 ZFP14Q9HCL3 533 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 OBP2AQ9NY56 170 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 PLK2Q9NYY3 685 aa17.97■□□□□ 0.47
RPL39-202ENST00000468844 TYW5A2RUC4 315 aaKnown RBP17.96■□□□□ 0.47
RPL39-202ENST00000468844 ITGAVP06756 1048 aa17.96■□□□□ 0.47
RPL39-202ENST00000468844 SP100P23497 879 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms