RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DUSP23Q9BVJ7 150 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CALN1Q9BXU9 219 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 XYLT2Q9H1B5 865 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 OLFML3Q9NRN5 406 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 KLHL11Q9NVR0 708 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CLIC5Q9NZA1 410 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 ARHGAP20Q9P2F6 1191 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.71
HDAC3-203ENST00000467533 NEMP2A6NFY4 417 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 PRAMEF26H0Y7S4 382 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 K7ESM1 405 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 NOBOXO60393 691 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 TCEA3O75764 348 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 NEBLO76041 1014 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 IL1BP01584 269 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 LIPCP11150 499 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 IDEP14735 1019 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 TRIM21P19474 475 aaKnown RBP10.64□□□□□ -0.71
HDAC3-203ENST00000467533 NEK4P51957 841 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 NDST1P52848 882 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF445P59923 1031 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 KMT5BQ4FZB7 885 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 C9orf64Q5T6V5 341 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 ZCCHC8Q6NZY4 707 aaKnown RBP10.64□□□□□ -0.71
HDAC3-203ENST00000467533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF276Q8N554 614 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 C12orf29Q8N999 325 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 TPCN2Q8NHX9 752 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 TMA16Q96EY4 203 aaKnown RBP10.64□□□□□ -0.71
HDAC3-203ENST00000467533 FUCA2Q9BTY2 467 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 SDCBP2Q9H190 292 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 ADNPQ9H2P0 1102 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 CAAP1Q9H8G2 361 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 KIAA1586Q9HCI6 787 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 SEPT10Q9P0V9 454 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 HMGXB4Q9UGU5 601 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 DOCK9Q9BZ29 2069 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 ABCA12Q86UK0 2595 aa10.64□□□□□ -0.71
HDAC3-203ENST00000467533 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
HDAC3-203ENST00000467533 FBN2P35556 2912 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 EDDM13A0A1B0GTR0 161 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 TARSL2A2RTX5 802 aaKnown RBP10.63□□□□□ -0.71
HDAC3-203ENST00000467533 SCAMP1O15126 338 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 ASLP04424 464 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 CSKP41240 450 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 SGSHP51688 502 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 KIF11P52732 1056 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 KCNAB2Q13303 367 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 BIRC3Q13489 604 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 PSMD6Q15008 389 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 SNRNP35Q16560 246 aaKnown RBP10.63□□□□□ -0.71
HDAC3-203ENST00000467533 DSG4Q86SJ6 1040 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 TRIM69Q86WT6 500 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 STK40Q8N2I9 435 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 HTR3CQ8WXA8 447 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 ELMO3Q96BJ8 720 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 EPB41L5Q9HCM4 733 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 TMPRSS4Q9NRS4 437 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 NCKIPSDQ9NZQ3 722 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 ANAPC2Q9UJX6 822 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 PLAAQ9Y263 795 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 PCDHGA7Q9Y5G6 932 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 ICE1Q9Y2F5 2266 aa10.63□□□□□ -0.71
HDAC3-203ENST00000467533 ITPR2Q14571 2701 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 TTC34A8MYJ7 566 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 PLD2O14939 933 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 STX6O43752 255 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 TBL1XO60907 577 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 MZF1P28698 734 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-203ENST00000467533 DRD3P35462 400 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 PDX1P52945 283 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 MORC3Q14149 939 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 SPIDRQ14159 915 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 DRAP1Q14919 205 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-203ENST00000467533 TRIP4Q15650 581 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-203ENST00000467533 BMT2Q1RMZ1 405 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF542PQ5EBM4 170 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 ATCAYQ86WG3 371 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 MFN1Q8IWA4 741 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 ARHGAP18Q8N392 663 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 FBXO39Q8N4B4 442 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF557Q8N988 423 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-203ENST00000467533 DNAJC19Q96DA6 116 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 MRGPRX3Q96LB0 322 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 FAM129BQ96TA1 746 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 CEP83Q9Y592 693 aa10.62□□□□□ -0.71
HDAC3-203ENST00000467533 SCN8AQ9UQD0 1980 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 MUSKO15146 869 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 SLC31A1O15431 190 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 SLC7A4O43246 635 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 PLRG1O43660 514 aaKnown RBP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 RNGTTO60942 597 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms