RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ASNSD1Q9NWL6 643 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 DDX56Q9NY93 547 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 RRN3Q9NYV6 651 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 MARCH2Q9P0N8 246 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 KLHL14Q9P2G3 628 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 TBC1D14Q9P2M4 693 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 FBXL21Q9UKT6 434 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 STAP1Q9ULZ2 295 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 CPQQ9Y646 472 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 TTC28Q96AY4 2481 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 YJEFN3A6XGL0 299 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 TNFRSF10AO00220 468 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 CHADO15335 359 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PAPSS1O43252 624 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 RIPK2O43353 540 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 RASSF9O75901 435 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PRAMEF12O95522 483 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 TTC4O95801 387 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 CFHP08603 1231 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 VIMP08670 466 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 GDI1P31150 447 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PHBP35232 272 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 VIPR2P41587 438 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PTGIRP43119 386 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 HARS2P49590 506 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 SLC6A3Q01959 620 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 FCHO2Q0JRZ9 810 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 EFEMP1Q12805 493 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 USP4Q13107 963 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 MTA1Q13330 715 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PTK6Q13882 451 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PDGFRLQ15198 375 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 ZRSR2Q15696 482 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 UAP1Q16222 522 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PTPN20Q4JDL3 420 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 TNFAIP8L3Q5GJ75 292 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 TANGO2Q6ICL3 276 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 C1orf228Q6PIY5 440 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 C4orf22Q6V702 233 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 SLC26A9Q7LBE3 791 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 SCD5Q86SK9 330 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PHF13Q86YI8 300 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 TDRPQ86YL5 185 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 MIB1Q86YT6 1006 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 SLC44A3Q8N4M1 653 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 WDTC1Q8N5D0 677 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PRELID2Q8N945 189 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 EXD1Q8NHP7 514 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 SH3RF2Q8TEC5 729 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 FBF1Q8TES7 1133 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 CCT6BQ92526 530 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 DNASE1L2Q92874 299 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 CD101Q93033 1021 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 RSRC1Q96IZ7 334 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 SERPINB11Q96P15 392 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 CYP2S1Q96SQ9 504 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 NUP85Q9BW27 656 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 DCLK3Q9C098 648 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 NMUR1Q9HB89 426 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 SMPD4Q9NXE4 827 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 ADAM22Q9P0K1 906 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 IP6K2Q9UHH9 426 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 LGALS13Q9UHV8 139 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 MUTYHQ9UIF7 546 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 ANAPC5Q9UJX4 755 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 PACSIN2Q9UNF0 486 aaPredicted RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 DRG1Q9Y295 367 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 ZNF510Q9Y2H8 683 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 ARL2BPQ9Y2Y0 163 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 HBS1LQ9Y450 684 aaKnown RBP10.33□□□□□ -0.76
PMF1-204ENST00000466489 TICRRQ7Z2Z1 1910 aa10.33□□□□□ -0.76
PMF1-204ENST00000466489 KIF26AQ9ULI4 1882 aaPredicted RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 E2F8A0AVK6 867 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 LEFTY2O00292 366 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 NFATC1O95644 943 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 LMNAP02545 664 aaKnown RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 ERBB2P04626 1255 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ATP5BP06576 529 aaKnown RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 IRF1P10914 325 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC2A3P11169 496 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 CHRNB2P17787 502 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 MMP8P22894 467 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 FCARP24071 287 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ADCY8P40145 1251 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 GABRB2P47870 512 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 GSCP56915 257 aaPredicted RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC29A2Q14542 456 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 MESDQ14696 234 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ACAP1Q15027 740 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ZNF77Q15935 545 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms