RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 NPHP1O15259 732 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 INPPL1O15357 1258 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 PLAUP00749 431 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ENO1P06733 434 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 CHN1P15882 459 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 HOXB6P17509 224 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 EPHB2P29323 1055 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 HOXA7P31268 230 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ARHGAP25P42331 645 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 SOX2P48431 317 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 PCP4P48539 62 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 PAPOLAP51003 745 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 TAF12Q16514 161 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 FAM110CQ1W6H9 321 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ARL13AQ5H913 290 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 MIS18BP1Q6P0N0 1132 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 CYP26C1Q6V0L0 522 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ZNF813Q6ZN06 617 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 RBM44Q6ZP01 1051 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ANKS1BQ7Z6G8 1248 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 TMEM57Q8N5G2 664 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 PTGR2Q8N8N7 351 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 EXD3Q8N9H8 876 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 FSIP1Q8NA03 581 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 SDCCAG3Q96C92 435 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 RBM17Q96I25 401 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 ZNF347Q96SE7 839 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 QTRT1Q9BXR0 403 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 RIC8AQ9NPQ8 531 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 MTMR4Q9NYA4 1195 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 GGA3Q9NZ52 723 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 DNAJC16Q9Y2G8 782 aa4.54□□□□□ -1.68
PTPN12-210ENST00000464313 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
PTPN12-210ENST00000464313 RRN3P2A6NIE6 340 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 NCAM2O15394 837 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 POLBP06746 335 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 TGM2P21980 687 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 PRPH2P23942 346 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 SLC12A1Q13621 1099 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 SUPT20HL1Q3ZLR7 823 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 ZNF474Q6S9Z5 364 aaPredicted RBP4.53□□□□□ -1.68
PTPN12-210ENST00000464313 RTL10Q7L3V2 364 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 MDGA2Q7Z553 956 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 LRRTM4Q86VH4 590 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 VPS52Q8N1B4 723 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 ADPRHL1Q8NDY3 354 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 ATP2A3Q93084 1043 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 TWNKQ96RR1 684 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 SCNM1Q9BWG6 230 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 SFXN1Q9H9B4 322 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 TLR8Q9NR97 1041 aaKnown RBP4.53□□□□□ -1.68
PTPN12-210ENST00000464313 TMLHEQ9NVH6 421 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 FBXO4Q9UKT5 387 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 MAFFQ9ULX9 164 aa4.53□□□□□ -1.68
PTPN12-210ENST00000464313 EMSYQ7Z589 1322 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 LMTK3Q96Q04 1460 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 SMIM35A0A1B0GVV1 85 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 PPP6CO00743 305 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 DSCR3O14972 297 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 HNRNPRO43390 633 aaKnown RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 TUBB4AP04350 444 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 PYGLP06737 847 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 AKR1A1P14550 325 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 RPS6KB1P23443 525 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 GLE1Q53GS7 698 aaKnown RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 MEX3CQ5U5Q3 659 aaKnown RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 RINLQ6ZS11 566 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 CNGA4Q8IV77 575 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 UEVLDQ8IX04 471 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 ZFPM2Q8WW38 1151 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 IP6K1Q92551 441 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 P2RY11Q96G91 374 aa4.52□□□□□ -1.69
PTPN12-210ENST00000464313 ADAD1Q96M93 576 aaKnown RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 MOV10Q9HCE1 1003 aaKnown RBP4.52□□□□□ -1.69
PTPN12-210ENST00000464313 SPATA31A5Q5VU36 1347 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 SPATA31A7Q8IWB4 1347 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 C2CD4BA6NLJ0 364 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 ADAM10O14672 748 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 TP73O15350 636 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 CELA2AP08217 269 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 CPA1P15085 419 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 AVPR2P30518 371 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 PNPLA4P41247 253 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 MCM2P49736 904 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 ZBTB16Q05516 673 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 PGM5Q15124 567 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 SRSF7Q16629 238 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTPN12-210ENST00000464313 CTXN3Q4LDR2 81 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 LIPMQ5VYY2 423 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 SLC18B1Q6NT16 456 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 MTFR2Q6P444 385 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 SLC2A7Q6PXP3 512 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 YTHDF3Q7Z739 585 aaKnown RBP4.51□□□□□ -1.69
PTPN12-210ENST00000464313 SCN4BQ8IWT1 228 aa4.51□□□□□ -1.69
PTPN12-210ENST00000464313 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms