RNA–Protein interactions for RNA: ENST00000464163.1

FGFR1-215, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-215	ENST00000464163	TBC1D31	Q96DN5	1066 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	TRIM44	Q96DX7	344 aa	Predicted RBP	11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	ALG14	Q96F25	216 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	RNF157	Q96PX1	679 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	WDR24	Q96S15	920 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZYG11B	Q9C0D3	744 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	ARHGEF4	Q9NR80	690 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	TMEM248	Q9NWD8	314 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	DDX56	Q9NY93	547 aa	Known RBP	11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	TBC1D30	Q9Y2I9	924 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	OR51B4	Q9Y5P0	310 aa		11.63	□□□□□ -0.55
FGFR1-215	ENST00000464163	TTC28	Q96AY4	2481 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163		A0A0A0MRY4	1105 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163		A0A1B0GVM2	712 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	TCAF2	A6NFQ2	919 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	MIF4GD	A9UHW6	222 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF487	B1APH4	448 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	SPECC1L-ADORA2A	F8WAN1	911 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ENC1	O14682	589 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	KIF5C	O60282	957 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	TULP3	O75386	442 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CLDN11	O75508	207 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	LUC7L3	O95232	432 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	KRT1	P04264	644 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CYBB	P04839	570 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ERCC2	P18074	760 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	EPHB2	P29323	1055 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	HLA-F	P30511	346 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CTH	P32929	405 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CD70	P32970	193 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	HTR7	P34969	479 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF135	P52742	658 aa	Predicted RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZXDA	P98168	799 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	PFKP	Q01813	784 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	NR1H3	Q13133	447 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	LLGL1	Q15334	1064 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	RABGAP1L	Q5R372	815 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	TMEM215	Q68D42	235 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	RWDD4	Q6NW29	188 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	SPOCD1	Q6ZMY3	1216 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	NYAP1	Q6ZVC0	841 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CHST9	Q7L1S5	443 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	VSIG1	Q86XK7	387 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	TP53INP2	Q8IXH6	220 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF687	Q8N1G0	1237 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	RTL3	Q8N8U3	475 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	CSGALNACT1	Q8TDX6	532 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	UBE2Q2	Q8WVN8	375 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	EPAS1	Q99814	870 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	WNT16	Q9UBV4	365 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	INTS6	Q9UL03	887 aa	Known RBP	11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	HCN2	Q9UL51	889 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	JRKL	Q9Y4A0	524 aa		11.62	□□□□□ -0.55
FGFR1-215	ENST00000464163	TICRR	Q7Z2Z1	1910 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	hCG_1818297	A0A087WSY0	165 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163		A0A0D9SEW6	157 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	LRRD1	A4D1F6	860 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163		H3BRJ5	948 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	ATP1A1	P05023	1023 aa	Known RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	CHRM1	P11229	460 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	KRT10	P13645	584 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	GLUL	P15104	373 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	CD72	P21854	359 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	MZF1	P28698	734 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	RWDD2B	P57060	319 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	TPI1	P60174	286 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	GNG11	P61952	73 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	LMAN2	Q12907	356 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	SLC10A2	Q12908	348 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF211	Q13398	564 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	KRT81	Q14533	505 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	RPS6KA1	Q15418	735 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	GEN1	Q17RS7	908 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	AFMID	Q63HM1	303 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	TFAP2D	Q7Z6R9	452 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	RALGPS2	Q86X27	583 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	MAP7D3	Q8IWC1	876 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	ARHGAP12	Q8IWW6	846 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	UBALD2	Q8IYN6	164 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	APCDD1	Q8J025	514 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	CARNMT1	Q8N4J0	409 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	NPW	Q8N729	165 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	NETO2	Q8NC67	525 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	ALS2CR12	Q96Q35	445 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF670	Q9BS34	389 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	CALN1	Q9BXU9	219 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	SLC2A11	Q9BYW1	496 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	RETREG1	Q9H6L5	497 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	LRRC19	Q9H756	370 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	DNAJC17	Q9NVM6	304 aa	Known RBP	11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	DNAI1	Q9UI46	699 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	SLC27A6	Q9Y2P4	619 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	PIAS3	Q9Y6X2	628 aa		11.61	□□□□□ -0.55
FGFR1-215	ENST00000464163	DOCK4	Q8N1I0	1966 aa		11.6	□□□□□ -0.55
FGFR1-215	ENST00000464163	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms