RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TSC1Q92574 1164 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 SLC39A13Q96H72 371 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 HSFY1Q96LI6 401 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 OMDQ99983 421 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 ZSWIM1Q9BR11 485 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 NEUROG2Q9H2A3 272 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 ERVMER34-1Q9H9K5 563 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 STIM2Q9P246 746 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 ERVW-1Q9UQF0 538 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
HMGN1-210ENST00000464078 TK2O00142 265 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 LUC7L3O95232 432 aaKnown RBP17.9■□□□□ 0.46
HMGN1-210ENST00000464078 ADH1BP00325 375 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 ITGAVP06756 1048 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 SLC8A1P32418 973 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 RGS7P49802 495 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 ADPRHP54922 357 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 NXPH1P58417 271 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 CNGA2Q16280 664 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 PRAMEF14Q5SWL7 426 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 FBXL19Q6PCT2 694 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 TMEM270Q6UE05 265 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 MMAAQ8IVH4 418 aaKnown RBP17.9■□□□□ 0.46
HMGN1-210ENST00000464078 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-210ENST00000464078 OXR1Q8N573 874 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 AADATQ8N5Z0 425 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 DQX1Q8TE96 717 aaKnown RBP17.9■□□□□ 0.46
HMGN1-210ENST00000464078 FAM131CQ96AQ9 280 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 MYEOVQ96EZ4 313 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 DCBLD2Q96PD2 775 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 FAM129BQ96TA1 746 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 NRSN2Q9GZP1 204 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 GOLPH3LQ9H4A5 285 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 AASDHPPTQ9NRN7 309 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 MYLKQ15746 1914 aa17.9■□□□□ 0.46
HMGN1-210ENST00000464078 TTC34A8MYJ7 566 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 M0QYV0 167 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 CBX4O00257 560 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 PMM2O15305 246 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 SART1O43290 800 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 ZNF202O95125 648 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 FYNP06241 537 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 JUPP14923 745 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 GOT1P17174 413 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 C5AR1P21730 350 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 EIF2S3P41091 472 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 RXRGP48443 463 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 PSMD8P48556 350 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 FKBP3Q00688 224 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 DNAJC3Q13217 504 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 ILKQ13418 452 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 ELAVL3Q14576 367 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 RTP5Q14D33 572 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 FSCBQ5H9T9 825 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 BEND5Q7L4P6 421 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 CARNMT1Q8N4J0 409 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 SNIP1Q8TAD8 396 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 CLEC4CQ8WTT0 213 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 TSG101Q99816 390 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 NUCKS1Q9H1E3 243 aaKnown RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 RMND1Q9NWS8 449 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 ARMCX3Q9UH62 379 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-210ENST00000464078 TENM4Q6N022 2769 aa17.89■□□□□ 0.45
HMGN1-210ENST00000464078 SHROOM3Q8TF72 1996 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 TLR4O00206 839 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 WNT9AO14904 365 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 MOCS3O95396 460 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 PRCPP42785 496 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 CTSOP43234 321 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-210ENST00000464078 RPL34P49207 117 aaKnown RBP17.88■□□□□ 0.45
HMGN1-210ENST00000464078 ECT2LQ008S8 904 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 LRRC63Q05C16 580 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 DCAF6Q58WW2 860 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 SLC45A4Q5BKX6 768 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 HES3Q5TGS1 186 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 NAPEPLDQ6IQ20 393 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 MMS22LQ6ZRQ5 1243 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 KANSL1Q7Z3B3 1105 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 CACTIN-AS1Q8N1I8 211 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 EID2Q8N6I1 236 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 PIP4K2CQ8TBX8 421 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 ADAM32Q8TC27 787 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 SERAC1Q96JX3 654 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-210ENST00000464078 PRORYQ9H606 182 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 MGAQ8IWI9 3026 aa17.88■□□□□ 0.45
HMGN1-210ENST00000464078 PIK3R2O00459 728 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 ATXN7O15265 892 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-210ENST00000464078 TLX3O43711 291 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-210ENST00000464078 MZF1P28698 734 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-210ENST00000464078 NUDT1P36639 197 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 FMO5P49326 533 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 LRMPQ12912 555 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-210ENST00000464078 IQCHQ86VS3 1027 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 MFSD2AQ8NA29 543 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 LSM14AQ8ND56 463 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms