RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 C5orf22Q49AR2 442 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 OR6B2Q6IFH4 312 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 MMS22LQ6ZRQ5 1243 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 CACUL1Q86Y37 369 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 ZCCHC9Q8N567 271 aaKnown RBP21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 NT5C3BQ969T7 300 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 PABPC3Q9H361 631 aaKnown RBP21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 C6orf106Q9H6K1 298 aaPredicted RBP21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 NUMA1Q14980 2115 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 SIN3BO75182 1162 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 SEMA4FO95754 770 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 SULT2A1Q06520 285 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 KCNJ12Q14500 433 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 DRAP1Q14919 205 aaPredicted RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 TCP11X2Q5H9J9 407 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 RABGAP1LQ5R372 815 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 C9orf64Q5T6V5 341 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 IL27RAQ6UWB1 636 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 RBM43Q6ZSC3 357 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 FAM124AQ86V42 546 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 CCAR2Q8N163 923 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 TMEM35BQ8NCS4 154 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 OR2I1PQ8NGU4 316 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 ENOX1Q8TC92 643 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 PGAP3Q96FM1 320 aaPredicted RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 SAMSN1Q9NSI8 373 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 EIF2B4Q9UI10 523 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 FHOD1Q9Y613 1164 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 USP24Q9UPU5 2620 aa21.21■□□□□ 0.99
PDLIM4-205ENST00000463615 EDDM13A0A1B0GTR0 161 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 UCHL3P15374 230 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 CYP11B1P15538 503 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 MATKP42679 507 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 BNC1Q01954 994 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 OTUD1Q5VV17 481 aaPredicted RBP21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 CXorf57Q6NSI4 855 aaKnown RBP21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 FBXL22Q6P050 247 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 APCDD1Q8J025 514 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 PPP1R9BQ96SB3 815 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 NPY6RQ99463 290 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 MTG2Q9H4K7 406 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 PLCB1Q9NQ66 1216 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 ADAMTS1Q9UHI8 967 aa21.2■□□□□ 0.98
PDLIM4-205ENST00000463615 RNASEH1O60930 286 aaKnown RBP21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 GRAP2O75791 330 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 LSM8O95777 96 aaKnown RBP21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 CTSOP43234 321 aaPredicted RBP21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 CXCR3P49682 368 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 AFF3P51826 1226 aaKnown RBP21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 AUHQ13825 339 aaKnown RBP21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 ALG14Q96F25 216 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 FAM129BQ96TA1 746 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 ORAI3Q9BRQ5 295 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 STK33Q9BYT3 514 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 MIR1-1HGQ9H1L0 117 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 SYNCQ9H7C4 482 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 SLCO3A1Q9UIG8 710 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 FZD4Q9ULV1 537 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 NCKAP1Q9Y2A7 1128 aa21.19■□□□□ 0.98
PDLIM4-205ENST00000463615 TTC34A8MYJ7 566 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 CD27P26842 260 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 GRIA4P48058 902 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 RAPGEF1Q13905 1077 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 CST6Q15828 149 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 ST3GAL2Q16842 350 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 HSP90AA4PQ58FG1 418 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 BRMS1LQ5PSV4 323 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 ACBD5Q5T8D3 534 aaPredicted RBP21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 CDKAL1Q5VV42 579 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 DBX2Q6ZNG2 339 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 DHX40Q8IX18 779 aaKnown RBP21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 PTPRN2Q92932 1015 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 RNF34Q969K3 372 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 IGSF8Q969P0 613 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 BIRC7Q96CA5 298 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 ARHGEF38Q9NXL2 777 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 TBC1D30Q9Y2I9 924 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 HS3ST4Q9Y661 456 aa21.18■□□□□ 0.98
PDLIM4-205ENST00000463615 M0QYT0 321 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 PAGE1O75459 146 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 CLDN11O75508 207 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 TRIM16O95361 564 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 CER1O95813 267 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 F9P00740 461 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 ANP32AP39687 249 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 FOXC1Q12948 553 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 RNF219Q5W0B1 726 aaPredicted RBP21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 ARCQ7LC44 396 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 FRS2Q8WU20 508 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 FAM131CQ96AQ9 280 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 C18orf8Q96DM3 657 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 RPRD1AQ96P16 312 aaPredicted RBP21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 TMEM121BQ9BXQ6 578 aaPredicted RBP21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 ADAM33Q9BZ11 813 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 PIGVQ9NUD9 493 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 FBXL12Q9NXK8 326 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 STAP1Q9ULZ2 295 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 DAAM1Q9Y4D1 1078 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms