RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 CCR1P32246 355 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
NIN-208ENST00000463419 NOVA1P51513 510 aaKnown RBP13.4□□□□□ -0.26
NIN-208ENST00000463419 SNX16P57768 344 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 CCDC117Q8IWD4 279 aaPredicted RBP13.4□□□□□ -0.26
NIN-208ENST00000463419 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
NIN-208ENST00000463419 RNF34Q969K3 372 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 CNTNAP3BQ96NU0 1288 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 GBP4Q96PP9 640 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 CNTNAP3Q9BZ76 1288 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 VPS16Q9H269 839 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
NIN-208ENST00000463419 SUN2Q9UH99 717 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 NCOR2Q9Y618 2525 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 NUP205Q92621 2012 aa13.4□□□□□ -0.26
NIN-208ENST00000463419 METTL12A8MUP2 240 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 MEI4A8MW99 385 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 F8VZ95 297 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 ASLP04424 464 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 PMLP29590 882 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 ACSL1P33121 698 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 NOS2P35228 1153 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 ATXN3P54252 364 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 ST8SIA6P61647 398 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 NME3Q13232 169 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 KRT31Q15323 416 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 FBXL22Q6P050 247 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 CIR1Q86X95 450 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 APCDD1Q8J025 514 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 OR2I1PQ8NGU4 316 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 DNASE2BQ8WZ79 361 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 GANQ9H2C0 597 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 FBRSQ9HAH7 460 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 ERVW-1Q9UQF0 538 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 M0QYT0 321 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 SIN3BO75182 1162 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 MOCS3O95396 460 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 DNTTP04053 509 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 SRPRAP08240 638 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 GNSP15586 552 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 TFE3P19532 575 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 CSRP1P21291 193 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 MATKP42679 507 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 GABRB2P47870 512 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 NUMBP49757 651 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 KLK7P49862 253 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 ECT2LQ008S8 904 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 CENPCQ03188 943 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 RABGAP1LQ5R372 815 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 ZNF776Q68DI1 518 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 DHX40Q8IX18 779 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 ZCCHC9Q8N567 271 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 MINDY1Q8N5J2 469 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 KDM1BQ8NB78 822 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 C18orf8Q96DM3 657 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 RPL10LQ96L21 214 aaKnown RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 NPY6RQ99463 290 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 C6orf106Q9H6K1 298 aaPredicted RBP13.39□□□□□ -0.27
NIN-208ENST00000463419 PIGVQ9NUD9 493 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
NIN-208ENST00000463419 MYO18AQ92614 2054 aaKnown RBP13.38□□□□□ -0.27
NIN-208ENST00000463419 A0A1B0GTW7 788 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 TCAF2A6NFQ2 919 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 SYPP08247 313 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 MMEP08473 750 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 CEACAM1P13688 526 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 MZF1P28698 734 aaPredicted RBP13.38□□□□□ -0.27
NIN-208ENST00000463419 GGCXP38435 758 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 IRAK1P51617 712 aa13.38□□□□□ -0.27
NIN-208ENST00000463419 SEMA3BQ13214 749 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms