RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LAT	O43561	262 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	DFNA5	O60443	496 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	LUC7L3	O95232	432 aa	Known RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	SRPRA	P08240	638 aa	Known RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	EPHA8	P29322	1005 aa	Predicted RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	GPD2	P43304	727 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ACADVL	P49748	655 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	CCR5	P51681	352 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	METAP1	P53582	386 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ADPRH	P54922	357 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	NXPH1	P58417	271 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	YWHAE	P62258	255 aa	Known RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	PPP2CB	P62714	309 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	PPP2CA	P67775	309 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	DNAJC3	Q13217	504 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	DCAF6	Q58WW2	860 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	SFMBT2	Q5VUG0	894 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	SYPL2	Q5VXT5	272 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	BEND5	Q7L4P6	421 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	TAC4	Q86UU9	113 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	TMPRSS12	Q86WS5	348 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	MMAA	Q8IVH4	418 aa	Known RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	APCDD1	Q8J025	514 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ZNF557	Q8N988	423 aa	Predicted RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ENGASE	Q8NFI3	743 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	OR2T34	Q8NGX1	318 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	PTPRN2	Q92932	1015 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	PRMT1	Q99873	361 aa	Known RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ACE2	Q9BYF1	805 aa	Predicted RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	GDPD2	Q9HCC8	539 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	STIM2	Q9P246	746 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ARHGAP20	Q9P2F6	1191 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	FTSJ1	Q9UET6	329 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	CYTH4	Q9UIA0	394 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	SLCO3A1	Q9UIG8	710 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	CNTN6	Q9UQ52	1028 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	NAALADL1	Q9UQQ1	740 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	TLR6	Q9Y2C9	796 aa		11.56	□□□□□ -0.56
PTPN7-204	ENST00000462815	EIF4E1B	A6NMX2	242 aa	Known RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	PLK4	O00444	970 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	ENC1	O14682	589 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	TLX3	O43711	291 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	FBXO21	O94952	628 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	ZIC2	O95409	532 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	HSP90AA1	P07900	732 aa	Known RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	VAV1	P15498	845 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	CD44	P16070	742 aa	Known RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	MZF1	P28698	734 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	CD38	P28907	300 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	SLC8A1	P32418	973 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	STK19	P49842	368 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	PITX1	P78337	314 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	LRRC63	Q05C16	580 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	CCDC157	Q569K6	752 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	FBXL19	Q6PCT2	694 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	SPATS2	Q86XZ4	545 aa	Known RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	ARHGEF19	Q8IW93	802 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	CFAP52	Q8N1V2	620 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	CARNMT1	Q8N4J0	409 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	ADAM32	Q8TC27	787 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	FRS2	Q8WU20	508 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	ERCC4	Q92889	916 aa	Predicted RBP	11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	KREMEN1	Q96MU8	473 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	SERPINB11	Q96P15	392 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	GSDMA	Q96QA5	445 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	NCKAP1	Q9Y2A7	1128 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	KNTC1	P50748	2209 aa		11.55	□□□□□ -0.56
PTPN7-204	ENST00000462815	EDDM13	A0A1B0GTR0	161 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	FAM47DP	A6NHR8	397 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	RFPL3	O75679	317 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	RNASEH2A	O75792	299 aa	Known RBP	11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	C1QL1	O75973	258 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	GOT1	P17174	413 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	BMP6	P22004	513 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	RXRG	P48443	463 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	ECT2L	Q008S8	904 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	GCNT1	Q02742	428 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	BNIP3	Q12983	259 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	STIL	Q15468	1287 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	INAVA	Q3KP66	663 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	CXorf57	Q6NSI4	855 aa	Known RBP	11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	ADAT2	Q7Z6V5	191 aa	Known RBP	11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	STK40	Q8N2I9	435 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	ALG14	Q96F25	216 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	CNDP2	Q96KP4	475 aa	Known RBP	11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	RPL10L	Q96L21	214 aa	Known RBP	11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	SLC4A5	Q9BY07	1137 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	MIS12	Q9H081	205 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	ERVMER34-1	Q9H9K5	563 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	RMND1	Q9NWS8	449 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	PCDHB4	Q9Y5E5	795 aa		11.54	□□□□□ -0.56
PTPN7-204	ENST00000462815	LRRC72	A6NJI9	287 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	LDOC1	O95751	146 aa	Predicted RBP	11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	ADH1B	P00325	375 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	C1S	P09871	688 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	TACR2	P21452	398 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	C5AR1	P21730	350 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	ITPKB	P27987	946 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms