RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 DLL1O00548 723 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 SPOPO43791 374 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 MOCS3O95396 460 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 KRT7P08729 469 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 CHRNB1P11230 501 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 RHOQP17081 205 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 EPHB2P29323 1055 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 CD70P32970 193 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 HTR7P34969 479 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 LMAN2Q12907 356 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 FZD5Q13467 585 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 LRRC32Q14392 662 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 GEN1Q17RS7 908 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 PPP6R3Q5H9R7 873 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 DGKKQ5KSL6 1271 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 POLNQ7Z5Q5 900 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 BMP8AQ7Z5Y6 402 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 ANKS1BQ7Z6G8 1248 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 NLRP14Q86W24 1093 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 SFTPA1Q8IWL2 248 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 CCDC105Q8IYK2 499 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 LMLNQ96KR4 655 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 C11orf16Q9NQ32 467 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 RBM12Q9NTZ6 932 aaKnown RBP12.14□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF212Q9UDV6 495 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 GGA2Q9UJY4 613 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 SIT1Q9Y3P8 196 aa12.14□□□□□ -0.47
CPNE1-221ENST00000462352 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 GRID2IPA4D2P6 1211 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 ANTXRLA6NF34 631 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 PRRT4C9JH25 899 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 NCAM2O15394 837 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 PI15O43692 258 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 GOT1P17174 413 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 AOC1P19801 751 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 TNFRSF4P43489 277 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF135P52742 658 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 CDH6P55285 790 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 TPI1P60174 286 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 FBXO43Q4G163 708 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 LRRC38Q5VT99 294 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 CXorf57Q6NSI4 855 aaKnown RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 RFX8Q6ZV50 586 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 RHOT1Q8IXI2 618 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 RNF10Q8N5U6 811 aaKnown RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 LRRC57Q8N9N7 239 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 OR52K2Q8NGK3 314 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 RETREG1Q9H6L5 497 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 PCDH18Q9HCL0 1135 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 TMEM248Q9NWD8 314 aa12.13□□□□□ -0.47
CPNE1-221ENST00000462352 CWC15Q9P013 229 aaKnown RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 KIAA1522Q9P206 1035 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-221ENST00000462352 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 H3BRJ5 948 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 FGF10O15520 208 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-221ENST00000462352 DAPK3O43293 454 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 PSTPIP1O43586 416 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 GPR37L1O60883 481 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 RNF40O75150 1001 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 PALMO75781 387 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 DCNP07585 359 aaKnown RBP12.12□□□□□ -0.47
CPNE1-221ENST00000462352 RHOCP08134 193 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CD48P09326 243 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 TNNT1P13805 278 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 OR1E1P30953 314 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 ARL4AP40617 200 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CSKP41240 450 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 HCAR3P49019 387 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 MAPKAPK2P49137 400 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 ARSEP51690 589 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CLCN5P51795 746 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 SEC13P55735 322 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 OXCT1P55809 520 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 KRT81Q14533 505 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 FUT11Q495W5 492 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 PITRM1Q5JRX3 1037 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 C6orf118Q5T5N4 469 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 TMEM215Q68D42 235 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 ADIPOR2Q86V24 386 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 AHI1Q8N157 1196 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms