RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 IL1RAPL2Q9NP60 686 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 IL17RBQ9NRM6 502 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 AFF4Q9UHB7 1163 aaKnown RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 KCNE5Q9UJ90 142 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 CCPG1Q9ULG6 757 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
COPS3-204ENST00000462236 USP15Q9Y4E8 981 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 ARID1BQ8NFD5 2236 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 PCNX2A6NKB5 2137 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 NAV2Q8IVL1 2488 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 WDR19Q8NEZ3 1342 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 FLNBO75369 2602 aaKnown RBP5.46□□□□□ -1.53
COPS3-204ENST00000462236 CCDC195A0A1B0GUA6 201 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 MARCH11A6NNE9 402 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 AHRRA9YTQ3 701 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 BTN3A1O00481 513 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 TBX3O15119 743 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 ANP32CO43423 234 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PRDM1O75626 825 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 DNAJB5O75953 348 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PRSS23O95084 383 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 SCAF4O95104 1147 aaKnown RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 GH1P01241 217 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PIM1P11309 404 aaPredicted RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 BRAFP15056 766 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 CASTP20810 708 aaKnown RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 FDXRP22570 491 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 DNAJB1P25685 340 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 VIPR2P41587 438 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 SUMO3P55854 103 aaPredicted RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 LY6KQ17RY6 165 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PDCD4Q53EL6 469 aaKnown RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 ADGRD2Q7Z7M1 963 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 C1orf210Q8IVY1 113 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 ZNF444Q8N0Y2 327 aaPredicted RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 CFAP52Q8N1V2 620 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 TMEM105Q8N8V8 129 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PDPRQ8NCN5 879 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 CPT1CQ8TCG5 803 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 ATP8B4Q8TF62 1192 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 KIF1BPQ96EK5 621 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 MARS2Q96GW9 593 aaKnown RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 YME1L1Q96TA2 773 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 NAA15Q9BXJ9 866 aaKnown RBP5.46□□□□□ -1.54
COPS3-204ENST00000462236 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.54
COPS3-204ENST00000462236 BOLA2Q9H3K6 86 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 TMEM74BQ9NUR3 256 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 TRPM5Q9NZQ8 1165 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PHTF1Q9UMS5 762 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 PCDHGB6Q9Y5F9 930 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.46□□□□□ -1.54
COPS3-204ENST00000462236 ADGRA3Q8IWK6 1321 aa5.46□□□□□ -1.54
COPS3-204ENST00000462236 SETXQ7Z333 2677 aaKnown RBP5.45□□□□□ -1.54
COPS3-204ENST00000462236 GREB1Q4ZG55 1949 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 A0A087WWL8 130 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 A0A1W2PS29 197 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 RHPN2P1A8MT19 583 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 RSPH10B2B2RC85 870 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 E9PLN8 166 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 MYO1CO00159 1063 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 GPANK1O95872 356 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 GRPP07492 148 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 IFIT2P09913 472 aaKnown RBP5.45□□□□□ -1.54
COPS3-204ENST00000462236 RSPH10BP0C881 870 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 FGFR4P22455 802 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 CTNNB1P35222 781 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 HTR3AP46098 478 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 OCA2Q04671 838 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SLC13A2Q13183 592 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 BRD3Q15059 726 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 CDSNQ15517 529 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SPDYE7PQ495Y7 208 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 HSP90AB4PQ58FF6 505 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 CRB2Q5IJ48 1285 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 IL31Q6EBC2 164 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 TMEM184AQ6ZMB5 413 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 RNF207Q6ZRF8 634 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 LRRC55Q6ZSA7 311 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 CLASRPQ8N2M8 674 aaKnown RBP5.45□□□□□ -1.54
COPS3-204ENST00000462236 TMEM132CQ8N3T6 1108 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 VN1R2Q8NFZ6 395 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 PPTC7Q8NI37 304 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 IL17DQ8TAD2 202 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 POC1BQ8TC44 478 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SPPL3Q8TCT6 385 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 GJA10Q969M2 543 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 FUBP1Q96AE4 644 aaKnown RBP5.45□□□□□ -1.54
COPS3-204ENST00000462236 RMDN1Q96DB5 314 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SLC39A13Q96H72 371 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 TNIP3Q96KP6 325 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
COPS3-204ENST00000462236 VKORC1Q9BQB6 163 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 HEPHQ9BQS7 1158 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 C16orf70Q9BSU1 422 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SPATA5L1Q9BVQ7 753 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 KATNAL1Q9BW62 490 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 S1PR5Q9H228 398 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 SMURF2Q9HAU4 748 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms