RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 OMDQ99983 421 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 CAPN8A6NHC0 703 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 K7ELQ4 463 aaPredicted RBP11.25□□□□□ -0.61
CBX3-205ENST00000462165 LATO43561 262 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 RHOBTB3O94955 611 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ADH1BP00325 375 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 SETSIPP0DME0 302 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 GOT1P17174 413 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 CKMT2P17540 419 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ACP1P24666 158 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ACTN2P35609 894 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 MXI1P50539 228 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ADPRHP54922 357 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 TLE3Q04726 772 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ADAM9Q13443 819 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D25Q3MII6 688 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
CBX3-205ENST00000462165 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
CBX3-205ENST00000462165 AADATQ8N5Z0 425 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 MFSD2AQ8NA29 543 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 SERAC1Q96JX3 654 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 PRICKLE1Q96MT3 831 aaPredicted RBP11.25□□□□□ -0.61
CBX3-205ENST00000462165 FAM129BQ96TA1 746 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 STIM2Q9P246 746 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 CLCA2Q9UQC9 943 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 ERVW-1Q9UQF0 538 aa11.25□□□□□ -0.61
CBX3-205ENST00000462165 EDDM13A0A1B0GTR0 161 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 TYW5A2RUC4 315 aaKnown RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 TTC34A8MYJ7 566 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 O00370 1275 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 F13A1P00488 732 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 VDRP11473 427 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 LCP1P13796 627 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 C5AR1P21730 350 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 GLDCP23378 1020 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 PSMD8P48556 350 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 TBX4P57082 545 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 CXADRP78310 365 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 INSM1Q01101 510 aaPredicted RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 CFHR1Q03591 330 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 PITRM1Q5JRX3 1037 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 NADSYN1Q6IA69 706 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 NAPEPLDQ6IQ20 393 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 IQCHQ86VS3 1027 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 SPATS2Q86XZ4 545 aaKnown RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 GUF1Q8N442 669 aaKnown RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 DCBLD1Q8N8Z6 715 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 IRGQQ8WZA9 623 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 FAM131CQ96AQ9 280 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
CBX3-205ENST00000462165 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 COL6A6A6NMZ7 2263 aa11.24□□□□□ -0.61
CBX3-205ENST00000462165 TDRD6O60522 2096 aaKnown RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 STX10O60499 249 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 MAGEC1O60732 1142 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 LUC7L3O95232 432 aaKnown RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 MOCS3O95396 460 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 ZSCAN22P10073 491 aaPredicted RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 CD19P15391 556 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 NUDT1P36639 197 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 CTSOP43234 321 aaPredicted RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 YWHAEP62258 255 aaKnown RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 PPP2CBP62714 309 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 PPP2CAP67775 309 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 ECT2LQ008S8 904 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 CCDC173Q0VFZ6 552 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 OVGP1Q12889 678 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 CUL2Q13617 745 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 CDH18Q13634 790 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 FSCBQ5H9T9 825 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 MS4A13Q5J8X5 152 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 MMS22LQ6ZRQ5 1243 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 CCDC117Q8IWD4 279 aaPredicted RBP11.23□□□□□ -0.61
CBX3-205ENST00000462165 STK40Q8N2I9 435 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 SLC35F5Q8WV83 523 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 EEF2KMTQ96G04 330 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 WBP1Q96G27 269 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms