RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LZTS1Q9Y250 596 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 G3V2L1 256 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 RNF103O00237 685 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 NEMP1O14524 444 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 MFSD11O43934 449 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 CLPTM1O96005 669 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 GLDCP23378 1020 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 EDNRBP24530 442 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 RGS2P41220 211 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 RPL5P46777 297 aaKnown RBP18.89■□□□□ 0.61
HPS3-204ENST00000462030 THOP1P52888 689 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 NAB1Q13506 487 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 DLG2Q15700 870 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 NADK2Q4G0N4 442 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 TDRD5Q8NAT2 981 aaKnown RBP18.89■□□□□ 0.61
HPS3-204ENST00000462030 CHST13Q8NET6 341 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 FCRL3Q96P31 734 aaPredicted RBP18.89■□□□□ 0.61
HPS3-204ENST00000462030 MRPL45Q9BRJ2 306 aaKnown RBP18.89■□□□□ 0.61
HPS3-204ENST00000462030 CAB39LQ9H9S4 337 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 TCF7L2Q9NQB0 619 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 HOXC10Q9NYD6 342 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 RPS6KL1Q9Y6S9 549 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 SCN1AP35498 2009 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 XRCC1P18887 633 aaPredicted RBP18.88■□□□□ 0.61
HPS3-204ENST00000462030 PIK3R1P27986 724 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 CCDC153Q494R4 210 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 CNBD2Q96M20 576 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 C11orf84Q9BUA3 381 aaPredicted RBP18.88■□□□□ 0.61
HPS3-204ENST00000462030 GRIP2Q9C0E4 1043 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 PTTG2Q9NZH5 202 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 SEPT10Q9P0V9 454 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 KIAA1257Q9ULG3 409 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 AP4B1Q9Y6B7 739 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 USP3Q9Y6I4 520 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.88■□□□□ 0.61
HPS3-204ENST00000462030 C19orf81C9J6K1 198 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 LTFP02788 710 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 ATP6V1B1P15313 513 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 DESP17661 470 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 GARSP41250 739 aaKnown RBP18.88■□□□□ 0.61
HPS3-204ENST00000462030 SOWAHAQ2M3V2 549 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 DCAF15Q66K64 600 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 KLHDC10Q6PID8 442 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 ADAM32Q8TC27 787 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 PDZD7Q9H5P4 517 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 DPP3Q9NY33 737 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 ZNF112Q9UJU3 913 aa18.88■□□□□ 0.61
HPS3-204ENST00000462030 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
HPS3-204ENST00000462030 AMHP03971 560 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 CHRNGP07510 517 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 MPSTP25325 297 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 MAGEA12P43365 314 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 CCR10P46092 362 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 NUMBP49757 651 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 ATXN3P54252 364 aaPredicted RBP18.87■□□□□ 0.61
HPS3-204ENST00000462030 SH3BGRP55822 239 aaPredicted RBP18.87■□□□□ 0.61
HPS3-204ENST00000462030 MYBPC1Q00872 1141 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 ADGRE1Q14246 886 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 PAOXQ6QHF9 649 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 DSELQ8IZU8 1212 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 P2RY11Q96G91 374 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 LRGUKQ96M69 825 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 CDRT15Q96T59 188 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 CPNE1Q99829 537 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 ASB7Q9H672 318 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 COPS7BQ9H9Q2 264 aaPredicted RBP18.87■□□□□ 0.61
HPS3-204ENST00000462030 RIMS3Q9UJD0 308 aa18.87■□□□□ 0.61
HPS3-204ENST00000462030 CCDC160A6NGH7 325 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 TOMM70O94826 608 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 PENKP01210 267 aaPredicted RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 PTPN9P43378 593 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 PKNOX1P55347 436 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 ZNF280AP59817 542 aaPredicted RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 FLOT2Q14254 428 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 LILRA2Q8N149 483 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 RNF148Q8N7C7 305 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 AGAP2Q99490 1192 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 RBBP8Q99708 897 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 EIF2B3Q9NR50 452 aaKnown RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 HSFX1Q9UBD0 423 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 TMCO1Q9UM00 188 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 PRPF19Q9UMS4 504 aaKnown RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 HCRTO43612 131 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 POLBP06746 335 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 MCF2P10911 925 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 SERPINB8P50452 374 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 USP46P62068 366 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 AMHR2Q16671 573 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 ZNF423Q2M1K9 1284 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 RARS2Q5T160 578 aaKnown RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 GRTP1Q5TC63 336 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 STRA8Q7Z7C7 330 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 CENPIQ92674 756 aaPredicted RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 USP13Q92995 863 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms