RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PRMT1Q99873 361 aaKnown RBP23.53■■□□□ 1.36
PTPN4-207ENST00000460162 GAREM1Q9H706 876 aa23.53■■□□□ 1.36
PTPN4-207ENST00000460162 DNAJC12Q9UKB3 198 aa23.53■■□□□ 1.36
PTPN4-207ENST00000460162 AJAP1Q9UKB5 411 aaPredicted RBP23.53■■□□□ 1.36
PTPN4-207ENST00000460162 NCKAP1Q9Y2A7 1128 aa23.53■■□□□ 1.36
PTPN4-207ENST00000460162 CEP83Q9Y592 693 aa23.53■■□□□ 1.36
PTPN4-207ENST00000460162 AKAP13Q12802 2813 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 ASPMQ8IZT6 3477 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 TMEM131Q92545 1883 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 EDDM13A0A1B0GTR0 161 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 A0A1B0GVM2 712 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 TARSL2A2RTX5 802 aaKnown RBP23.52■■□□□ 1.36
PTPN4-207ENST00000460162 TCAF2A6NFQ2 919 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 DAB1O75553 588 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 GRIA4P48058 902 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 ECT2LQ008S8 904 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 BNC1Q01954 994 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 TEAD4Q15561 434 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 TRIP6Q15654 476 aaKnown RBP23.52■■□□□ 1.36
PTPN4-207ENST00000460162 CST6Q15828 149 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 DPCR1Q3MIW9 517 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 FAM183BPQ6ZVS7 135 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 DHX40Q8IX18 779 aaKnown RBP23.52■■□□□ 1.36
PTPN4-207ENST00000460162 CCAR2Q8N163 923 aaKnown RBP23.52■■□□□ 1.36
PTPN4-207ENST00000460162 GATA6Q92908 595 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 BIRC7Q96CA5 298 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 CAMK1GQ96NX5 476 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 DACH1Q9UI36 760 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 PCDHB9Q9Y5E1 797 aa23.52■■□□□ 1.36
PTPN4-207ENST00000460162 PLXNA2O75051 1894 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 PRKCSHP14314 528 aaPredicted RBP23.51■■□□□ 1.35
PTPN4-207ENST00000460162 CD27P26842 260 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 ERCC5P28715 1186 aaPredicted RBP23.51■■□□□ 1.35
PTPN4-207ENST00000460162 KRT9P35527 623 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 CTSOP43234 321 aaPredicted RBP23.51■■□□□ 1.35
PTPN4-207ENST00000460162 OXCT1P55809 520 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 C9orf64Q5T6V5 341 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 SLC26A9Q7LBE3 791 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 NDST4Q9H3R1 872 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 IL21RQ9HBE5 538 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 TM9SF3Q9HD45 589 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 TM7SF3Q9NS93 570 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 FBXL12Q9NXK8 326 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 FZD4Q9ULV1 537 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 FNDC3AQ9Y2H6 1198 aaKnown RBP23.51■■□□□ 1.35
PTPN4-207ENST00000460162 PCDHGB2Q9Y5G2 931 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 SLCO1B1Q9Y6L6 691 aa23.51■■□□□ 1.35
PTPN4-207ENST00000460162 SYNJ2BP-COX16A0A087WUM0 186 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 A0A1B0GVT2 93 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 TTC34A8MYJ7 566 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 FSBPO95073 299 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 ERBB2P04626 1255 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 SULT2A1Q06520 285 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 HLA-BQ31612 363 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 PTPN20Q4JDL3 420 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 VWA3BQ502W6 1294 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 KIAA0895LQ68EN5 471 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 OR6B2Q6IFH4 312 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 SLC47A2Q86VL8 602 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 ZDHHC17Q8IUH5 632 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 FAM71AQ8IYT1 594 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 APCDD1Q8J025 514 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 KDF1Q8NAX2 398 aaPredicted RBP23.5■■□□□ 1.35
PTPN4-207ENST00000460162 ZNF397Q8NF99 534 aaPredicted RBP23.5■■□□□ 1.35
PTPN4-207ENST00000460162 GANCQ8TET4 914 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 RNF34Q969K3 372 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 SYNCQ9H7C4 482 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 COX16Q9P0S2 106 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 PCOLCE2Q9UKZ9 415 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 MSRB2Q9Y3D2 182 aa23.5■■□□□ 1.35
PTPN4-207ENST00000460162 FOXN3O00409 490 aaPredicted RBP23.49■■□□□ 1.35
PTPN4-207ENST00000460162 MID1O15344 667 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 CBFA2T3O75081 653 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 GRAP2O75791 330 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 IGHV4-34P06331 123 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 CLCN1P35523 988 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 NNMTP40261 264 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 CSNK1EP49674 416 aaKnown RBP23.49■■□□□ 1.35
PTPN4-207ENST00000460162 PLK1P53350 603 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 BPIFB4P59827 614 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 SLC6A3Q01959 620 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 MIIPQ5JXC2 388 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 RAB44Q7Z6P3 723 aaPredicted RBP23.49■■□□□ 1.35
PTPN4-207ENST00000460162 GLRX5Q86SX6 157 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 CIR1Q86X95 450 aaPredicted RBP23.49■■□□□ 1.35
PTPN4-207ENST00000460162 TUBGCP2Q9BSJ2 902 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 SERGEFQ9UGK8 458 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 ADAMTS1Q9UHI8 967 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 KLK13Q9UKR3 277 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 ZFHX4Q86UP3 3567 aa23.49■■□□□ 1.35
PTPN4-207ENST00000460162 FLRT2O43155 660 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 ADH1BP00325 375 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 PNMA6AP0CW24 399 aaPredicted RBP23.48■■□□□ 1.35
PTPN4-207ENST00000460162 PDGFRAP16234 1089 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 NOS2P35228 1153 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 ELAVL3Q14576 367 aaKnown RBP23.48■■□□□ 1.35
PTPN4-207ENST00000460162 KIF19Q2TAC6 998 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 CXorf57Q6NSI4 855 aaKnown RBP23.48■■□□□ 1.35
PTPN4-207ENST00000460162 FBXL22Q6P050 247 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 MMAAQ8IVH4 418 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms