RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GOLGA6L9A6NEM1 432 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 TSPAN3O60637 253 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 DAB1O75553 588 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 RHOBTB1O94844 696 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 FYNP06241 537 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 NTSR1P30989 418 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 RFC1P35251 1148 aaPredicted RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 ELF2Q15723 593 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 TMEM215Q68D42 235 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 REXO1L1PQ8IX06 675 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 TMEFF1Q8IYR6 380 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 CCAR2Q8N163 923 aaKnown RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 RNF10Q8N5U6 811 aaKnown RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 DEFB119Q8N690 84 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 ZNF564Q8TBZ8 553 aaPredicted RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 FAM149B1Q96BN6 582 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 CDK5RAP1Q96SZ6 601 aaKnown RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 ABCC13Q9NSE7 274 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 LCMT1Q9UIC8 334 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 PCDHGA5Q9Y5G8 931 aa16.14■□□□□ 0.17
SDF4-204ENST00000459994 ATXN2Q99700 1313 aaKnown RBP16.14■□□□□ 0.17
SDF4-204ENST00000459994 GOLGA6L7A0A1B0GV03 622 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 C2CD4BA6NLJ0 364 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 GFRA2O00451 464 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 ALDH1A2O94788 518 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 GJB6O95452 261 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 NDUFV2P19404 249 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 NOS2P35228 1153 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 MATKP42679 507 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 PTGER3P43115 390 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 DHPSP49366 369 aaPredicted RBP16.13■□□□□ 0.17
SDF4-204ENST00000459994 RPL7AP62424 266 aaKnown RBP16.13■□□□□ 0.17
SDF4-204ENST00000459994 CHPFQ8IZ52 775 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 DEFB106AQ8N104 65 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 CPXM2Q8N436 756 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 C12orf50Q8NA57 414 aaPredicted RBP16.13■□□□□ 0.17
SDF4-204ENST00000459994 JOSD2Q8TAC2 188 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 WFDC5Q8TCV5 224 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 SORCS1Q8WY21 1168 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 MYEOVQ96EZ4 313 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 MCEEQ96PE7 176 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 GABRG3Q99928 467 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 DCLK3Q9C098 648 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 OSGEPQ9NPF4 335 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 TMEM74BQ9NUR3 256 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 RRN3Q9NYV6 651 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.13■□□□□ 0.17
SDF4-204ENST00000459994 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
SDF4-204ENST00000459994 SALL4Q9UJQ4 1053 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 ZNF510Q9Y2H8 683 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 DUSP10Q9Y6W6 482 aa16.13■□□□□ 0.17
SDF4-204ENST00000459994 TP53BP1Q12888 1972 aaPredicted RBP16.13■□□□□ 0.17
SDF4-204ENST00000459994 NUMA1Q14980 2115 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 TM4SF5O14894 197 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 GRAP2O75791 330 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 PDGFRAP16234 1089 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 GPD1P21695 349 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 HOXD9P28356 352 aaPredicted RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 CHKAP35790 457 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 FLT3P36888 993 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 IL12RB1P42701 662 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 PTPN9P43378 593 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 RNASE9P60153 205 aaKnown RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 TRNP1Q6NT89 227 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 MSANTD2Q6P1R3 559 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 NT5C3BQ969T7 300 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 VPS45Q9NRW7 570 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 OLA1Q9NTK5 396 aaKnown RBP16.12■□□□□ 0.17
SDF4-204ENST00000459994 TMEM51Q9NW97 253 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 TRIM10Q9UDY6 481 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 IP6K2Q9UHH9 426 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 SLC27A6Q9Y2P4 619 aa16.12■□□□□ 0.17
SDF4-204ENST00000459994 LNP1A1A4G5 178 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 MYO1FO00160 1098 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 CAPN9O14815 690 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 IGLV3-27P01718 113 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 SDHBP21912 280 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 SDC4P31431 198 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 SLC6A4P31645 630 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 OGDHQ02218 1023 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 PREPLQ4J6C6 727 aaPredicted RBP16.11■□□□□ 0.17
SDF4-204ENST00000459994 DCAF6Q58WW2 860 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 PPM1JQ5JR12 505 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 STPG1Q5TH74 334 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 NADSYN1Q6IA69 706 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 RFWD3Q6PCD5 774 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 TRMT11Q7Z4G4 463 aaKnown RBP16.11■□□□□ 0.17
SDF4-204ENST00000459994 EMC1Q8N766 993 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 DDI1Q8WTU0 396 aa16.11■□□□□ 0.17
SDF4-204ENST00000459994 RNF139Q8WU17 664 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms