RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 BGNP21810 368 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 SLC26A3P40879 764 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 NEDD8Q15843 81 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 Q3C1V9 767 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 SPDYAQ5MJ70 313 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 VSIG10LQ86VR7 867 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 MAB21L3Q8N8X9 362 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 AP3S1Q92572 193 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 TUBGCP5Q96RT8 1024 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 OSBPL6Q9BZF3 934 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 POLD4Q9HCU8 107 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 STON1Q9Y6Q2 735 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 PIPSLA2A3N6 862 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 BTNL10A8MVZ5 291 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 SUPT3HB4E1H0 165 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 SBF1O95248 1867 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 SLC1A6P48664 564 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 CASP5P51878 434 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 MYL6P60660 151 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 BNIP2Q12982 314 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZNF235Q14590 738 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 TFDP3Q5H9I0 405 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 NT5DC1Q5TFE4 455 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 DSTYKQ6XUX3 929 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 SZRD1Q7Z422 152 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.81
UFD1-205ENST00000459854 FBXW8Q8N3Y1 598 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.96□□□□□ -0.812e-10■■■■■ 35.6
UFD1-205ENST00000459854 POC5Q8NA72 575 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZFAND2BQ8WV99 257 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 GLT1D1Q96MS3 346 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 KLF6Q99612 283 aaPredicted RBP9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZNF221Q9UK13 617 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 CYP3A4P08684 503 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 PDGFRAP16234 1089 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 TNK2Q07912 1038 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 MEA1Q16626 185 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ARCQ7LC44 396 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 TTC30AQ86WT1 665 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 ZDHHC13Q8IUH4 622 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 RNF208Q9H0X6 261 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 TXNRD2Q9NNW7 524 aa9.96□□□□□ -0.81
UFD1-205ENST00000459854 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.82
UFD1-205ENST00000459854 GPD1P21695 349 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 RAD51Q06609 339 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ENPEPQ07075 957 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ATP6AP1LQ52LC2 224 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 GRTP1Q5TC63 336 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ZNF57Q68EA5 555 aaPredicted RBP9.96□□□□□ -0.82
UFD1-205ENST00000459854 ADHFE1Q8IWW8 467 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 LEMD2Q8NC56 503 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
UFD1-205ENST00000459854 MYDGFQ969H8 173 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 PTCD3Q96EY7 689 aaKnown RBP9.96□□□□□ -0.82
UFD1-205ENST00000459854 HPS4Q9NQG7 708 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 CD274Q9NZQ7 290 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 C2CD2LO14523 706 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 MEIS2O14770 477 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 TPST1O60507 370 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ATG7O95352 703 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 KCNJ1P48048 391 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 POU4F1Q01851 419 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 LGALS3BPQ08380 585 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 MAPK11Q15759 364 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 LAYNQ6UX15 382 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 PACS1Q6VY07 963 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 KIAA0408Q6ZU52 694 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 INTS13Q9NVM9 706 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 ZSCAN32Q9NX65 697 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 PHF11Q9UIL8 331 aa9.96□□□□□ -0.82
UFD1-205ENST00000459854 PRKCZQ05513 592 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 KRT33BQ14525 404 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CDC73Q6P1J9 531 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 METTL7BQ6UX53 244 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 NAT14Q8WUY8 206 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PROX1Q92786 737 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PPP1R36Q96LQ0 422 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PTPN18Q99952 460 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CDH9Q9ULB4 789 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 SLC39A10Q9ULF5 831 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 TRMUO75648 421 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 CCNHP51946 323 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 GSCP56915 257 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 MGAT5Q09328 741 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CNTN1Q12860 1018 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 SPIDRQ14159 915 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 GRB14Q14449 540 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PDK4Q16654 411 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 ZNF568Q3ZCX4 644 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 POTEGQ6S5H5 508 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PNPT1Q8TCS8 783 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 CLEC4DQ8WXI8 215 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 TBCCD1Q9NVR7 557 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CLIC5Q9NZA1 410 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms