RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SMPD4Q9NXE4 827 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 SMARCAL1Q9NZC9 954 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 SAMD15Q9P1V8 674 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNPEPQ9ULA0 475 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 NFU1Q9UMS0 254 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 SNX24Q9Y343 169 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 FARP1Q9Y4F1 1045 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TTLL3Q9Y4R7 772 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CPQQ9Y646 472 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 OBSL1O75147 1896 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMEM265A0A087WTH1 108 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 A0A1B0GVM2 712 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 C2orf78A6NCI8 922 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TCAF2A6NFQ2 919 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 FANCGO15287 622 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 STC2O76061 302 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TBX18O95935 607 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 OAS1P00973 400 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 IGLV3-25P01717 112 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 F11P03951 625 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RHOCP08134 193 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 POU2F2P09086 479 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CD48P09326 243 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCNB1P14635 433 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 HMGA1P17096 107 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 FSHRP23945 695 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 GARSP41250 739 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 MTHFRP42898 656 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RECQLP46063 649 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 IFNAR2P48551 515 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATXN1P54253 815 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 EIF3BP55884 814 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC7A9P82251 487 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CDK16Q00536 496 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAD51Q06609 339 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC12A1Q13621 1099 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 MORF4L2Q15014 288 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CA9Q16790 459 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 DUSP6Q16828 381 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 PARP6Q2NL67 630 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNAJC21Q5F1R6 531 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RNF219Q5W0B1 726 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ALS2CLQ60I27 953 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 DENND2CQ68D51 928 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 NAPEPLDQ6IQ20 393 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TRNP1Q6NT89 227 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RETSATQ6NUM9 610 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF783Q6ZMS7 281 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CHST9Q7L1S5 443 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 GRASPQ7Z6J2 395 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CARNMT1Q8N4J0 409 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RTL3Q8N8U3 475 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNAAF3Q8N9W5 541 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TDRD5Q8NAT2 981 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 VN1R2Q8NFZ6 395 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 GDPD5Q8WTR4 605 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 USP13Q92995 863 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 HDAC11Q96DB2 347 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 PABPC5Q96DU9 382 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC39A13Q96H72 371 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CYP2S1Q96SQ9 504 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM118BQ9BPY3 351 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TRIM51Q9BSJ1 452 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 SPON2Q9BUD6 331 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 C2orf49Q9BVC5 232 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 KLF16Q9BXK1 252 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMEM121BQ9BXQ6 578 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CRISPLD1Q9H336 500 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKZF1Q9H8Y5 726 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZFP14Q9HCL3 533 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 GDF3Q9NR23 364 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAB6BQ9NRW1 208 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMEM248Q9NWD8 314 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 OSER1Q9NX31 292 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 GDE1Q9NZC3 331 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 KIAA1522Q9P206 1035 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 CFAP97Q9P2B7 532 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 SAE1Q9UBE0 346 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RSPH14Q9UHP6 348 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 IPO11Q9UI26 975 aaKnown RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAB21Q9UL25 225 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM50BQ9Y247 325 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 NEU2Q9Y3R4 380 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 HS3ST4Q9Y661 456 aa5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZFP37Q9Y6Q3 630 aaPredicted RBP5.99□□□□□ -1.45
RNU1-88P-201ENST00000459274 TCRBV7S2A1N4TA0A589 114 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ILVBLA1L0T0 632 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 C5orf60A6NFR6 353 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 WASH4PA8MWX3 477 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 RNF103O00237 685 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CBX4O00257 560 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNALI1O14645 258 aaPredicted RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CHADO15335 359 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 EIF3HO15372 352 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TBL1XO60907 577 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 GCATO75600 419 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NFATC1O95644 943 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ADH1CP00326 375 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms