RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ITGA2BP08514 1039 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 RALBP11234 206 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 CYP3A5P20815 502 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 ADORA2AP29274 412 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 SERPINB6P35237 376 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 GRIA1P42261 906 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 INCA1Q0VD86 236 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 KLF10Q13118 480 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 ORC1Q13415 861 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.01
VPS50-208ENST00000458707 TMEM132BQ14DG7 1078 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TLR1Q15399 786 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 CA9Q16790 459 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TCHHL1Q5QJ38 904 aaPredicted RBP8.71□□□□□ -1.01
VPS50-208ENST00000458707 FAM182AQ5T1J6 154 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 LCLAT1Q6UWP7 414 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 C10orf107Q8IVU9 208 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 PQLC1Q8N2U9 271 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 PHTF2Q8N3S3 785 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TTLL6Q8N841 843 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 DNERQ8NFT8 737 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 STON2Q8WXE9 905 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 CDKL2Q92772 493 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 DCUN1D1Q96GG9 259 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 HIC2Q96JB3 615 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TEX13BQ9BXU2 312 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 RBM38Q9H0Z9 239 aaKnown RBP8.71□□□□□ -1.01
VPS50-208ENST00000458707 FZD8Q9H461 694 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 EIF2B3Q9NR50 452 aaKnown RBP8.71□□□□□ -1.01
VPS50-208ENST00000458707 MTMR10Q9NXD2 777 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 BTBD7Q9P203 1132 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 STK39Q9UEW8 545 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 KIAA1257Q9ULG3 409 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 DTNAQ9Y4J8 743 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 CDY2AQ9Y6F7 541 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 CDY1Q9Y6F8 540 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 WDR27A2RRH5 827 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 UNCXA6NJT0 531 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ZBTB14O43829 449 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 TMCC1O94876 653 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 OR6B1O95007 311 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 KRT19P08727 400 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 UBA1P22314 1058 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 GLDCP23378 1020 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CYP2F1P24903 491 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 HOXD10P28358 340 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 STAT5BP51692 787 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 SLC10A2Q12908 348 aaPredicted RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 STILQ15468 1287 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 DPYSL2Q16555 572 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CDO1Q16878 200 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CCDC153Q494R4 210 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ATF7IP2Q5U623 682 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 FAM160B1Q5W0V3 765 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 OR6B2Q6IFH4 312 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ZFP1Q6P2D0 407 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 LRRC8BQ6P9F7 803 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 OLFML1Q6UWY5 402 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 B3GNT6Q6ZMB0 384 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 RSPH3Q86UC2 560 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 HACE1Q8IYU2 909 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 UNC5BQ8IZJ1 945 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 AHI1Q8N157 1196 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CATSPER1Q8NEC5 780 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 UBA3Q8TBC4 463 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ARNTL2Q8WYA1 636 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 IRGQQ8WZA9 623 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 NACC2Q96BF6 587 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CCDC124Q96CT7 223 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 CNDP1Q96KN2 507 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 FAM167AQ96KS9 214 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 NAT9Q9BTE0 207 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 CDH19Q9H159 772 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 VPS33BQ9H267 617 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 Q9H521 79 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ZNF696Q9H7X3 374 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CYP4F11Q9HBI6 524 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 GPATCH2LQ9NWQ4 482 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 TMEM216Q9P0N5 145 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 TMED5Q9Y3A6 229 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CAPN8A6NHC0 703 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 TMEM114B3SHH9 223 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 SLC22A2O15244 555 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ADCY6O43306 1168 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 STRNO43815 780 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 MAP3K6O95382 1288 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CLPTM1O96005 669 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 NFICP08651 508 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 SRGAP2CP0DJJ0 459 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CXCL8P10145 99 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 PGAM1P18669 254 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 MX2P20592 715 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 SDC4P31431 198 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms