RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SRPRAP08240 638 aaKnown RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 IL12RB1P42701 662 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 ATXN1P54253 815 aaKnown RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 RPL7AP62424 266 aaKnown RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 NRG1Q02297 640 aaPredicted RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 PLEKHG6Q3KR16 790 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 FSCBQ5H9T9 825 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 C6orf118Q5T5N4 469 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 TMEM215Q68D42 235 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 SCYL2Q6P3W7 929 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 ASCL5Q7RTU5 278 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 SLFN11Q7Z7L1 901 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 SETD3Q86TU7 594 aaPredicted RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 MDGA1Q8NFP4 955 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 WFDC5Q8TCV5 224 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 ZNF653Q96CK0 615 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 LOXL4Q96JB6 756 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 HINFPQ9BQA5 517 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 PPARGC1AQ9UBK2 798 aaKnown RBP16.64■□□□□ 0.25
CD28-203ENST00000458610 OR12D3Q9UGF7 316 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 ATG2BQ96BY7 2078 aa16.64■□□□□ 0.25
CD28-203ENST00000458610 WASH3PC4AMC7 463 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 E9PAM4 449 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 MAP3K13O43283 966 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 RNF8O76064 485 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 PSMA2P25787 234 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 CSKP41240 450 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 HDAC4P56524 1084 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ECT2LQ008S8 904 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ELF2Q15723 593 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 FUT11Q495W5 492 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 EFHC2Q5JST6 749 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 CCDC122Q5T0U0 273 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ALKBH5Q6P6C2 394 aaKnown RBP16.63■□□□□ 0.25
CD28-203ENST00000458610 TMC6Q7Z403 805 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
CD28-203ENST00000458610 C14orf80Q86SX3 495 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 FNIP1Q8TF40 1166 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 CYB5D2Q8WUJ1 264 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 SORCS1Q8WY21 1168 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ZC3H10Q96K80 434 aaKnown RBP16.63■□□□□ 0.25
CD28-203ENST00000458610 DNAJC7Q99615 494 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 TPSD1Q9BZJ3 242 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ZYG11BQ9C0D3 744 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 DEF6Q9H4E7 631 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
CD28-203ENST00000458610 IGLV3-10A0A075B6K4 115 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 SSU72P8A0A1W2PR75 194 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 TMEM191CA6NGB0 347 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 CCP110O43303 1012 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 RETP07949 1114 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 RHOCP08134 193 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 GABRG2P18507 467 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 KRT83P78385 493 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 SCAPQ12770 1279 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 SFSWAPQ12872 951 aaKnown RBP16.62■□□□□ 0.25
CD28-203ENST00000458610 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 ACAP1Q15027 740 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 SLC36A4Q6YBV0 504 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 ZNF783Q6ZMS7 281 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
CD28-203ENST00000458610 OLIG1Q8TAK6 271 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 FEM1AQ9BSK4 669 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 TMEM245Q9H330 911 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 PRDM16Q9HAZ2 1276 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 DONSONQ9NYP3 566 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 ARHGAP20Q9P2F6 1191 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 MYO1AQ9UBC5 1043 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 VPS28Q9UK41 221 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 INTS6Q9UL03 887 aaKnown RBP16.62■□□□□ 0.25
CD28-203ENST00000458610 ERVW-1Q9UQF0 538 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 RAD54BQ9Y620 910 aa16.62■□□□□ 0.25
CD28-203ENST00000458610 A0A087X0T9 212 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 EIF3CLB5ME19 914 aaKnown RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 AKR1B15C9JRZ8 316 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 FAM228BP0C875 321 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 PRKCHP24723 683 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 OR1E1P30953 314 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 HOXC13P31276 330 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 ETFBP38117 255 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 GGCXP38435 758 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 SRSF5Q13243 272 aaKnown RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 CAMK2GQ13555 558 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 PTPRNQ16849 979 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 CXorf57Q6NSI4 855 aaKnown RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 KIAA1211LQ6NV74 962 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 CIR1Q86X95 450 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 ZNF683Q8IZ20 524 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 APCDD1Q8J025 514 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 OR2T3Q8NH03 318 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 EIF3CQ99613 913 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms