RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NUCKS1Q9H1E3 243 aaKnown RBP22.28■■□□□ 1.16
CPNE1-220ENST00000458038 NAALADL1Q9UQQ1 740 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 TP53BP1Q12888 1972 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-220ENST00000458038 E9PAM4 449 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 YKT6O15498 198 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 CDK4P11802 303 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 NNMTP40261 264 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 OXCT1P55809 520 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 SULT2A1Q06520 285 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 SMAD1Q15797 465 aaKnown RBP22.27■■□□□ 1.16
CPNE1-220ENST00000458038 DCAF6Q58WW2 860 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 TTI2Q6NXR4 508 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 NCEH1Q6PIU2 408 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 IGSF10Q6WRI0 2623 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 DHX40Q8IX18 779 aaKnown RBP22.27■■□□□ 1.16
CPNE1-220ENST00000458038 ERCC4Q92889 916 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-220ENST00000458038 PPP1R9BQ96SB3 815 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 NEUROG2Q9H2A3 272 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 MTG2Q9H4K7 406 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 TJP2Q9UDY2 1190 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 SLC12A6Q9UHW9 1150 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 CEP83Q9Y592 693 aa22.27■■□□□ 1.16
CPNE1-220ENST00000458038 A0A1B0GTQ1 180 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 FAM47DPA6NHR8 397 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 MID1O15344 667 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 RNASEH2AO75792 299 aaKnown RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 ADH1BP00325 375 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SLC2A3P11169 496 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 CD44P16070 742 aaKnown RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 GOT1P17174 413 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 C5AR1P21730 350 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SLC8A1P32418 973 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 MARSP56192 900 aaKnown RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 KCNH2Q12809 1159 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 COL9A2Q14055 689 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 FSCBQ5H9T9 825 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 KCNT1Q5JUK3 1230 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SND1Q7KZF4 910 aaKnown RBP eCLIP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 ENOSF1Q7L5Y1 443 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 TMEM110Q86TL2 294 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 MMAAQ8IVH4 418 aaKnown RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 TRIM59Q8IWR1 403 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 LGI2Q8N0V4 545 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 MDM1Q8TC05 714 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 FAM81BQ96LP2 452 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SLC4A5Q9BY07 1137 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 THAP9Q9H5L6 903 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 POPDC2Q9HBU9 364 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SCUBE2Q9NQ36 999 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.26■■□□□ 1.152e-10■□□□□ 11.3
CPNE1-220ENST00000458038 FTSJ1Q9UET6 329 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 MAN1B1Q9UKM7 699 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 COL5A1P20908 1838 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-220ENST00000458038 PLXNA2O75051 1894 aa22.26■■□□□ 1.15
CPNE1-220ENST00000458038 CELSR3Q9NYQ7 3312 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 A0A1W2PP55 124 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 GOLGA8CPA6NN73 597 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 KCNK3O14649 394 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 MOCS2O96007 188 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 CD38P28907 300 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 YWHAZP63104 245 aaKnown RBP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 MTA1Q13330 715 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 SLC45A4Q5BKX6 768 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 TTC39BQ5VTQ0 682 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 SMYD5Q6GMV2 418 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 TAC4Q86UU9 113 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 ARHGEF19Q8IW93 802 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 CFAP52Q8N1V2 620 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 PDCD7Q8N8D1 485 aaKnown RBP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 ATP6V0D2Q8N8Y2 350 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 NELFBQ8WX92 580 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 MYEOVQ96EZ4 313 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 FAM129BQ96TA1 746 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 ELF4Q99607 663 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 SERGEFQ9UGK8 458 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 PCDHGA1Q9Y5H4 931 aa22.25■■□□□ 1.15
CPNE1-220ENST00000458038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.25■■□□□ 1.15
CPNE1-220ENST00000458038 TRABD2BA6NFA1 517 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 TTC34A8MYJ7 566 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 C10orf142B7Z368 130 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 AFPP02771 609 aaKnown RBP22.24■■□□□ 1.15
CPNE1-220ENST00000458038 C1SP09871 688 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 KRT5P13647 590 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 HOXB3P14651 431 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-220ENST00000458038 TACR2P21452 398 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ELAVL3Q14576 367 aaKnown RBP22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ZC3H12AQ5D1E8 599 aaKnown RBP22.24■■□□□ 1.15
CPNE1-220ENST00000458038 SYPL2Q5VXT5 272 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ISM2Q6H9L7 571 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 KLHL10Q6JEL2 608 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 LAYNQ6UX15 382 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 TMPRSS12Q86WS5 348 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 CHSY1Q86X52 802 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ADAM32Q8TC27 787 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ZNF606Q8WXB4 792 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 KREMEN1Q96MU8 473 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 KDM4CQ9H3R0 1056 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 AASDHPPTQ9NRN7 309 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 SLCO3A1Q9UIG8 710 aa22.24■■□□□ 1.15
CPNE1-220ENST00000458038 ASXL3Q9C0F0 2248 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms