RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 DHX35Q9H5Z1 703 aaKnown RBP12.75□□□□□ -0.37
LINC00959-201ENST00000456581 Q9Y3F1 56 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 AK5Q9Y6K8 562 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 NUP205Q92621 2012 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 CA12O43570 354 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 AOC2O75106 756 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 KRT37O76014 449 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TGDSO95455 350 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 POMCP01189 267 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 LMNAP02545 664 aaKnown RBP12.75□□□□□ -0.37
LINC00959-201ENST00000456581 LYNP07948 512 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SKIP12755 728 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 BCAT1P54687 386 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 GJA9P57773 515 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 KCNA10Q16322 511 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TAF2Q6P1X5 1199 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 AGMOQ6ZNB7 445 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ADAM32Q8TC27 787 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 KCNK16Q96T55 309 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TBCBQ99426 244 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 CCDC106Q9BWC9 280 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 MAN1C1Q9NR34 630 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TRMT13Q9NUP7 481 aaKnown RBP12.75□□□□□ -0.37
LINC00959-201ENST00000456581 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SCOCQ9UIL1 159 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 GSRP00390 522 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 APOEP02649 317 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ACAP1Q15027 740 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 STILQ15468 1287 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SPDYAQ5MJ70 313 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 NME8Q8N427 588 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 STKLD1Q8NE28 680 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SENP8Q96LD8 212 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SENP6Q9GZR1 1112 aaPredicted RBP12.75□□□□□ -0.37
LINC00959-201ENST00000456581 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 RNF186Q9NXI6 227 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TRPV2Q9Y5S1 764 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 ARL5CA6NH57 179 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 M0QZ92 97 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 AHCYL1O43865 530 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 MAP3K7CLP57077 242 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 SESN2P58004 480 aaPredicted RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 LBRQ14739 615 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 SV2CQ496J9 727 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 FASTKD1Q53R41 847 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 TCHHL1Q5QJ38 904 aaPredicted RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 MTBPQ96DY7 904 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 SPECC1L-ADORA2AF8WAN1 911 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 APOL1O14791 398 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 CHADO15335 359 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 BPGMP07738 259 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 CDC16Q13042 620 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 DCAF6Q58WW2 860 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 MFSD14CQ5VZR4 134 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 CRLF3Q8IUI8 442 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 DEFB106AQ8N104 65 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 GALNT15Q8N3T1 639 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PPFIBP2Q8ND30 876 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 SIGLEC10Q96LC7 697 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 ANKRD27Q96NW4 1050 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 LGMNQ99538 433 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 XAB2Q9HCS7 855 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
LINC00959-201ENST00000456581 TAGLN3Q9UI15 199 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 ADAMTS6Q9UKP5 1117 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 PADI3Q9ULW8 664 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 INPP5FQ9Y2H2 1132 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
LINC00959-201ENST00000456581 A0A088AWK7 358 aa12.73□□□□□ -0.37
LINC00959-201ENST00000456581 TPP1O14773 563 aa12.73□□□□□ -0.37
LINC00959-201ENST00000456581 ADAMTS4O75173 837 aa12.73□□□□□ -0.37
LINC00959-201ENST00000456581 TM7SF2O76062 418 aa12.73□□□□□ -0.37
LINC00959-201ENST00000456581 AMHP03971 560 aa12.73□□□□□ -0.37
LINC00959-201ENST00000456581 ALDOAP04075 364 aaKnown RBP12.73□□□□□ -0.37
LINC00959-201ENST00000456581 FCGRTP55899 365 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms