RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 GSC2O15499 205 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 LTFP02788 710 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 USP17L7P0C7H9 530 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 RGS2P41220 211 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 TPI1P60174 286 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 PPIDQ08752 370 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 STX3Q13277 289 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 SPANXN3Q5MJ09 141 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 BSPRYQ5W0U4 402 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 ALYREFQ86V81 257 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 ARID3BQ8IVW6 561 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 NMUR2Q9GZQ4 415 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 CHST12Q9NRB3 414 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 NCAM2O15394 837 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 IRX1P78414 480 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 GRIK3Q13003 919 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 INTS6LQ5JSJ4 861 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 DSTYKQ6XUX3 929 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 CRLF3Q8IUI8 442 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 ENDOVQ8N8Q3 282 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 RRN3Q9NYV6 651 aa18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 KLHL8Q9P2G9 620 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 HBS1LQ9Y450 684 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-209ENST00000456560 EIF4E1BA6NMX2 242 aaKnown RBP18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 GLRA3O75311 464 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 AP2A1O95782 977 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 POLBP06746 335 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 ITGA2BP08514 1039 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 NCAM1P13591 858 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 FASTKD1Q53R41 847 aaKnown RBP18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 N4BP2L1Q5TBK1 243 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 MBLAC2Q68D91 279 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 C16orf46Q6P387 395 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 RINLQ6ZS11 566 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 CTU1Q7Z7A3 348 aaKnown RBP18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 TEX9Q8N6V9 391 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 NPWQ8N729 165 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 OR52K1Q8NGK4 314 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 LPPQ93052 612 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 FCRL3Q96P31 734 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 APBA2Q99767 749 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 COLEC11Q9BWP8 271 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 OSBPL1AQ9BXW6 950 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 BRD8Q9H0E9 1235 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 THAP1Q9NVV9 213 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 DCDC2Q9UHG0 476 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 CENPFP49454 3210 aa18.83■□□□□ 0.6
SEMA3B-209ENST00000456560 CAPN14A8MX76 684 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 M0QZ92 97 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 PLIN3O60664 434 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 PRKCGP05129 697 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CXCR3P49682 368 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 OLIG2Q13516 323 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 FRG1Q14331 258 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 TAF1CQ15572 869 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 KCTD11Q693B1 232 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CES3Q6UWW8 571 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 C17orf99Q6UX52 265 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 C4orf50Q6ZRC1 276 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CERS2Q96G23 380 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CSNK1G1Q9HCP0 422 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CASS4Q9NQ75 786 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 DDIT4Q9NX09 232 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 TAS2R1Q9NYW7 299 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 LRRC42Q9Y546 428 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 RPS6KL1Q9Y6S9 549 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 COL4A4P53420 1690 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ARL5CA6NH57 179 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 MANSC4A6NHS7 340 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 TPBGLP0DKB5 382 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ERVK-10P10266 1014 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ESRRAP11474 423 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 RPL9P32969 192 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 CD68P34810 354 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ARL13BQ3SXY8 428 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 RFWD3Q6PCD5 774 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 RASSF3Q86WH2 238 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 TTC8Q8TAM2 541 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 RTP3Q9BQQ7 232 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 WWP1Q9H0M0 922 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ZFATQ9P243 1243 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ARMCX1Q9P291 453 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 GIT1Q9Y2X7 761 aa18.82■□□□□ 0.6
SEMA3B-209ENST00000456560 ZBTB24O43167 697 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 KPNA6O60684 536 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 F9P00740 461 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 CHRNA1P02708 482 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 FGF3P11487 239 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GP5P40197 560 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 PEX19P40855 299 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 AQP5P55064 265 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GALNT2Q10471 571 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 INSCQ1MX18 579 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GRTP1Q5TC63 336 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 AGMOQ6ZNB7 445 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 ZCCHC23Q6ZST2 131 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 MRPL10Q7Z7H8 261 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms