RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SLC25A52Q3SY17 297 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 FSCBQ5H9T9 825 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 FAM102AQ5T9C2 384 aaPredicted RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 TAF3Q5VWG9 929 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 ZNF776Q68DI1 518 aaPredicted RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 TRIM72Q6ZMU5 477 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 NOP9Q86U38 636 aaKnown RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 XYLT1Q86Y38 959 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 MYO19Q96H55 970 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 RPRD1AQ96P16 312 aaPredicted RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 GPR174Q9BXC1 333 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 NAT10Q9H0A0 1025 aaKnown RBP18.44■□□□□ 0.54
MSH6-207ENST00000456246 WDCPQ9H6R7 721 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
MSH6-207ENST00000456246 TARSL2A2RTX5 802 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 CDK11BP21127 795 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 CSRP1P21291 193 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 SOX5P35711 763 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 STAT1P42224 750 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 SULT1E1P49888 294 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 PLK1P53350 603 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 JAM2P57087 298 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 RPS14P62263 151 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 CDR2Q01850 454 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 AUHQ13825 339 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 FBXL22Q6P050 247 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 CACUL1Q86Y37 369 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 ZNF366Q8N895 744 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 MRGPRX3Q96LB0 322 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 ZDHHC5Q9C0B5 715 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 RSPH9Q9H1X1 276 aaPredicted RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 ARHGEF38Q9NXL2 777 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 NOCTQ9UK39 431 aaKnown RBP18.43■□□□□ 0.54
MSH6-207ENST00000456246 ERVW-1Q9UQF0 538 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 SIK3Q9Y2K2 1263 aa18.43■□□□□ 0.54
MSH6-207ENST00000456246 EDDM13A0A1B0GTR0 161 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 A0A1B0GTW7 788 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 LRRC10BA6NIK2 292 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 METTL12A8MUP2 240 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 CLDN11O75508 207 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 GFPT2O94808 682 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 KCNK5O95279 499 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 MMEP08473 750 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 ZNF18P17022 549 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 KCNA4P22459 653 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 MAPK8P45983 427 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 CXCR3P49682 368 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 RNASE9P60153 205 aaKnown RBP18.42■□□□□ 0.54
MSH6-207ENST00000456246 DEUP1Q05D60 604 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 SYCP1Q15431 976 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 C5orf22Q49AR2 442 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 NAA35Q5VZE5 725 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 MMS22LQ6ZRQ5 1243 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 USP30Q70CQ3 517 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 HDDC3Q8N4P3 179 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 NEK11Q8NG66 645 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 PCMTD1Q96MG8 357 aaPredicted RBP18.42■□□□□ 0.54
MSH6-207ENST00000456246 BTBD1Q9H0C5 482 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 SGK2Q9HBY8 427 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 PIGVQ9NUD9 493 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 NCKAP1Q9Y2A7 1128 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 HS3ST4Q9Y661 456 aa18.42■□□□□ 0.54
MSH6-207ENST00000456246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 PAGE1O75459 146 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 CYP1A1P04798 512 aaPredicted RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 VASPP50552 380 aaPredicted RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 NOVA1P51513 510 aaKnown RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 ZNF177Q13360 481 aaPredicted RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 DCAF12L1Q5VU92 463 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 OTUD1Q5VV17 481 aaPredicted RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 CXorf57Q6NSI4 855 aaKnown RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 ERGIC2Q96RQ1 377 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 TKTL2Q9H0I9 626 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 NLRC4Q9NPP4 1024 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 VANGL2Q9ULK5 521 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 ASCC3Q8N3C0 2202 aaKnown RBP18.41■□□□□ 0.54
MSH6-207ENST00000456246 PCDH15Q96QU1 1955 aa18.41■□□□□ 0.54
MSH6-207ENST00000456246 TPRP12270 2363 aaKnown RBP18.4■□□□□ 0.54
MSH6-207ENST00000456246 UPK3BL1B0FP48 263 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 UPK3BL2E5RIL1 263 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 OPHN1O60890 802 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 SIN3BO75182 1162 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 SEMA4FO95754 770 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 CEACAM1P13688 526 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 PDGFRAP16234 1089 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 MMP8P22894 467 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 RDXP35241 583 aaKnown RBP18.4■□□□□ 0.54
MSH6-207ENST00000456246 KLK7P49862 253 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 CDH4P55283 916 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 UBXN1Q04323 297 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 TYRO3Q06418 890 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 UAP1L1Q3KQV9 507 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 PSAPL1Q6NUJ1 521 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 LRRC31Q6UY01 552 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 FAM124AQ86V42 546 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 APCDD1Q8J025 514 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms