RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 APOL5Q9BWW9 433 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 MGAT1P26572 445 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PRKCIP41743 596 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CDH15P55291 814 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TIMM50Q3ZCQ8 353 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 KCTD8Q6ZWB6 473 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF605Q86T29 641 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 DAGLBQ8NCG7 672 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 BAIAP2Q9UQB8 552 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 A2ML1A8K2U0 1454 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TBX3O15119 743 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PSMD3O43242 534 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 SOAT2O75908 522 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 MPOP05164 745 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 AKT1P31749 480 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PRIM2P49643 509 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 DPYSL3Q14195 570 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CA9Q16790 459 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CDCA2Q69YH5 1023 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 ATPAF2Q8N5M1 289 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CENPIQ92674 756 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PABPC5Q96DU9 382 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 SLC7A8Q9UHI5 535 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TBX1O43435 398 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 SSNA1O43805 119 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 H6PDO95479 791 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 CACHD1Q5VU97 1274 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 AVENQ9NQS1 362 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 TUBGCP4Q9UGJ1 667 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 RNF112Q9ULX5 631 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 PCDHGA10Q9Y5H3 936 aa12.58□□□□□ -0.4
NEDD4L-208ENST00000456173 H0Y858 1186 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.43e-6■■■■□ 19.6
NEDD4L-208ENST00000456173 S100A6P06703 90 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SNRPB2P08579 225 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 HALP42357 657 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ACTR3P61158 418 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 TNK2Q07912 1038 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 FRMD7Q6ZUT3 714 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PNMA5Q96PV4 448 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 HGH1Q9BTY7 390 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 UBP1Q9NZI7 540 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 RAPGEFL1Q9UHV5 662 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ITGA11Q9UKX5 1188 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PRG3Q9Y2Y8 225 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 GAS2O43903 313 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 KLRC4O43908 158 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PENKP01210 267 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CCNB1P14635 433 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SFNP31947 248 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ATP13A4Q4VNC1 1196 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SEZ6Q53EL9 994 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ARCQ7LC44 396 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CBR4Q8N4T8 237 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 WDR36Q8NI36 951 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM45AQ8TCE6 357 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 NIF3L1Q9GZT8 377 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 STOML2Q9UJZ1 356 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SYNCRIPO60506 623 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 TSPAN19P0C672 248 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 FOSL2P15408 326 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 TPH1P17752 444 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CHRM3P20309 590 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SOAT1P35610 550 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CRKP46108 304 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SLC7A2P52569 658 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ECT2LQ008S8 904 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 KLF10Q13118 480 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF235Q14590 738 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 STXBP2Q15833 593 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SLC44A2Q8IWA5 706 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 LRTOMTQ8WZ04 291 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 NXNL1Q96CM4 212 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms