RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 E2F5Q15329 346 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 TAF5Q15542 800 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 HLA-BQ31612 363 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 ZC3H12AQ5D1E8 599 aaKnown RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 RAP1GAP2Q684P5 730 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 CIR1Q86X95 450 aaPredicted RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 LGI2Q8N0V4 545 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 MSANTD4Q8NCY6 345 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 C1orf216Q8TAB5 229 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 MYO19Q96H55 970 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 SERGEFQ9UGK8 458 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
TREX1-203ENST00000456089 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
TREX1-203ENST00000456089 CABIN1Q9Y6J0 2220 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 FAM47DPA6NHR8 397 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 F8VZ95 297 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SIN3BO75182 1162 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 FSBPO95073 299 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SEMA4FO95754 770 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 APOEP02649 317 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 ATP5BP06576 529 aaKnown RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 FTH1P19P0C7X4 201 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 CYP11B1P15538 503 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 TPM4P67936 248 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 CDK17Q00537 523 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 RING1Q06587 406 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SYCP1Q15431 976 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 DCAF6Q58WW2 860 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 KCNT1Q5JUK3 1230 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 BEND5Q7L4P6 421 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 KDF1Q8NAX2 398 aaPredicted RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 FIBINQ8TAL6 211 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SETD7Q8WTS6 366 aaKnown RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 ZCCHC14Q8WYQ9 949 aaKnown RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 RNF34Q969K3 372 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 MRGPRX3Q96LB0 322 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 BPIFA3Q9BQP9 254 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 TLR6Q9Y2C9 796 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.37□□□□□ -0.27
TREX1-203ENST00000456089 NEUROG3Q9Y4Z2 214 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 DMXL2Q8TDJ6 3036 aa13.37□□□□□ -0.27
TREX1-203ENST00000456089 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 IRAK2O43187 625 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 HSF2BPO75031 334 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 GFPT2O94808 682 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 DNTTP04053 509 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 GLI1P08151 1106 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 STAT1P42224 750 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 MATKP42679 507 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
TREX1-203ENST00000456089 KLK7P49862 253 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 ZNF165P49910 485 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 SLC14A1Q13336 389 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 CDH18Q13634 790 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 KIF19Q2TAC6 998 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 KLHL40Q2TBA0 621 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
TREX1-203ENST00000456089 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
TREX1-203ENST00000456089 SLCO6A1Q86UG4 719 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 CHSY1Q86X52 802 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 MARCH9Q86YJ5 346 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 APCDD1Q8J025 514 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 GANCQ8TET4 914 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 AZIN2Q96A70 460 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 RPL10LQ96L21 214 aaKnown RBP13.36□□□□□ -0.27
TREX1-203ENST00000456089 NAA15Q9BXJ9 866 aaKnown RBP13.36□□□□□ -0.27
TREX1-203ENST00000456089 BTBD1Q9H0C5 482 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 FAM204AQ9H8W3 233 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 TM9SF3Q9HD45 589 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 TM7SF3Q9NS93 570 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 SLCO3A1Q9UIG8 710 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 ERVW-1Q9UQF0 538 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 BTBD3Q9Y2F9 522 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 MSRB2Q9Y3D2 182 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms