RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ALX3O95076 343 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ZNF202O95125 648 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 KLKB1P03952 638 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CISD3P0C7P0 127 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM200BP0CF97 657 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 RARGP13631 454 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 P4HA1P13674 534 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TYRP14679 529 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 GABRG2P18507 467 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 NR2F2P24468 414 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 PSMC2P35998 433 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 P2RY2P41231 377 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 NOVA1P51513 510 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 RPL6Q02878 288 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CLCQ05315 142 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 PNOCQ13519 176 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 MPP2Q14168 576 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ST3GAL2Q16842 350 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TRIM61Q5EBN2 209 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 C10orf120Q5SQS8 335 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 EGFLAMQ63HQ2 1017 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ISM2Q6H9L7 571 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 KIAA1211LQ6NV74 962 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 KRBA2Q6ZNG9 492 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 HTR3DQ70Z44 454 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 REC114Q7Z4M0 266 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 SCD5Q86SK9 330 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 UNC93AQ86WB7 457 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 DDX42Q86XP3 938 aaKnown RBP eCLIP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ZNF513Q8N8E2 541 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 PDZD8Q8NEN9 1154 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 OR2I1PQ8NGU4 316 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CCDC26Q8TAB7 109 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 OLIG1Q8TAK6 271 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 GOLGA5Q8TBA6 731 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 OVCA2Q8WZ82 227 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TAF4BQ92750 862 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ANAPC16Q96DE5 110 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 HNRNPABQ99729 332 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 BBS2Q9BXC9 721 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CSNK1G1Q9HCP0 422 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 DNAJC17Q9NVM6 304 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 COMMD8Q9NX08 183 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 RALYQ9UKM9 306 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CLEC4EQ9ULY5 219 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 SCML2Q9UQR0 700 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TRAF3IP3Q9Y228 551 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 POLR3KQ9Y2Y1 108 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 RAD54BQ9Y620 910 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TDRD6O60522 2096 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM131Q92545 1883 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PLXNB3Q9ULL4 1909 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 A0A1W2PQF6 199 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 C1QTNF9BB2RNN3 333 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 TULP2O00295 520 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PIK3R2O00459 728 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 HOXC11O43248 304 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 FOXD2O60548 495 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 STC2O76061 302 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CALCAP01258 141 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 C1QTNF9P0C862 333 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 KRT13P13646 458 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 HOXB2P14652 356 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PMLP29590 882 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 NTSR1P30989 418 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 EIF2DP41214 584 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PRCPP42785 496 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 TUBP50607 506 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 KIF11P52732 1056 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PMS1P54277 932 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 RAD23BP54727 409 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 KRT85P78386 507 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 EFEMP1Q12805 493 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 LRMPQ12912 555 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DAB2IPQ5VWQ8 1189 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 GRAMD4Q6IC98 578 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 INTS8Q75QN2 995 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 LPCAT2Q7L5N7 544 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PIGZQ86VD9 579 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 SYT12Q8IV01 421 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DENND1CQ8IV53 801 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC41A1Q8IVJ1 513 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM186BQ8IYM0 893 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CHPFQ8IZ52 775 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DTWD1Q8N5C7 304 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 TERB1Q8NA31 727 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DEFB124Q8NES8 71 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 UBA3Q8TBC4 463 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 IPO4Q8TEX9 1081 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM174Q8WUU8 243 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CPLX3Q8WVH0 158 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DDX1Q92499 740 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 UBXN4Q92575 508 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 OTUB2Q96DC9 234 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms